RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 ACTBL2Q562R1 376 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 CCDC157Q569K6 752 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 ZNF667Q5HYK9 610 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 TEX30Q5JUR7 227 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 SPANXN2Q5MJ10 180 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.47□□□□□ -1.53
LRCH3-212ENST00000466845 OR5M10Q6IEU7 315 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 SPOPLQ6IQ16 392 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 RGS7BPQ6MZT1 257 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-212ENST00000466845 FUT10Q6P4F1 479 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 RFWD3Q6PCD5 774 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 WDR88Q6ZMY6 472 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 VTCN1Q7Z7D3 282 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 ADAMTSL2Q86TH1 951 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 ITIH5Q86UX2 942 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 GID4Q8IVV7 300 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 SERPINA12Q8IW75 414 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 KLHL7Q8IXQ5 586 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 BATF2Q8N1L9 274 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 BEND2Q8NDZ0 799 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 RP9Q8TA86 221 aaKnown RBP5.47□□□□□ -1.53
LRCH3-212ENST00000466845 GRAPLQ8TC17 118 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-212ENST00000466845 LRRC20Q8TCA0 184 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 CACNG8Q8WXS5 425 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 PHYHIPQ92561 330 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 KAT5Q92993 513 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 LRRC46Q96FV0 321 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 PRRC1Q96M27 445 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 TAAR6Q96RI8 345 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 ADAM2Q99965 735 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 SH2D3AQ9BRG2 576 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 WDR83Q9BRX9 315 aaKnown RBP5.47□□□□□ -1.53
LRCH3-212ENST00000466845 PRRG3Q9BZD7 231 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 UBXN6Q9BZV1 441 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 RPF1Q9H9Y2 349 aaKnown RBP5.47□□□□□ -1.53
LRCH3-212ENST00000466845 SMURF2Q9HAU4 748 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 SERHLQ9NQF3 203 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 ZNF302Q9NR11 478 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 TREX1Q9NSU2 369 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 C20orf96Q9NUD7 363 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-212ENST00000466845 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.47□□□□□ -1.53
LRCH3-212ENST00000466845 EXD2Q9NVH0 621 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 FAM118AQ9NWS6 357 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 CMTM6Q9NX76 183 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 MS4A12Q9NXJ0 267 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 GRHL1Q9NZI5 618 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 NYAP2Q9P242 653 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 NAGKQ9UJ70 344 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 DBNLQ9UJU6 430 aaKnown RBP5.47□□□□□ -1.53
LRCH3-212ENST00000466845 MAN1B1Q9UKM7 699 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 SNX7Q9UNH6 387 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 SLC12A4Q9UP95 1085 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 PADI2Q9Y2J8 665 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 TNS1Q9HBL0 1735 aaKnown RBP5.47□□□□□ -1.53
LRCH3-212ENST00000466845 PARP4Q9UKK3 1724 aaKnown RBP5.47□□□□□ -1.53
LRCH3-212ENST00000466845 ABCC6O95255 1503 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 OVOS2A0A0G2JMS6 1433 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 OVOS2A0A0J9YW53 1432 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 OVOS2Q6IE36 1432 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 MAST3O60307 1309 aa5.47□□□□□ -1.53
LRCH3-212ENST00000466845 WNK3Q9BYP7 1800 aa5.46□□□□□ -1.53
LRCH3-212ENST00000466845 USP47Q96K76 1375 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 LRRC37A3O60309 1634 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 OR2A25A4D2G3 310 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 ZNF233A6NK53 670 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 ASB14A6NK59 587 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 KDM4EB2RXH2 506 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-212ENST00000466845 BTBD18B2RXH4 712 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 TCP11X1B4DZS4 312 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 F8VP50 259 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 TOX3O15405 576 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-212ENST00000466845 ZNF264O43296 627 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 BUD23O43709 281 aaKnown RBP5.46□□□□□ -1.54
LRCH3-212ENST00000466845 TAF5LO75529 589 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 PDE9AO76083 593 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 CRYABP02511 175 aaKnown RBP5.46□□□□□ -1.54
LRCH3-212ENST00000466845 MT-ND2P03891 347 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 MT-ND5P03915 603 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 IFNA6P05013 189 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 SERPING1P05155 500 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 FAM58BPP0C7Q3 252 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 CPA3P15088 417 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 EN2P19622 333 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-212ENST00000466845 MX1P20591 662 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 DDCP20711 480 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 FBLP22087 321 aaKnown RBP5.46□□□□□ -1.54
LRCH3-212ENST00000466845 FDXRP22570 491 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 CCNOP22674 350 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 PON1P27169 355 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 CDKN1AP38936 164 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 TMED10P49755 219 aaKnown RBP5.46□□□□□ -1.54
LRCH3-212ENST00000466845 BCAP31P51572 246 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 HNRNPFP52597 415 aaKnown RBP5.46□□□□□ -1.54
LRCH3-212ENST00000466845 RIDAP52758 137 aaKnown RBP5.46□□□□□ -1.54
LRCH3-212ENST00000466845 NDST2P52849 883 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 EMP2P54851 167 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 UBE2G2P60604 165 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 B4GALNT1Q00973 533 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 CACNG1Q06432 222 aa5.46□□□□□ -1.54
LRCH3-212ENST00000466845 ILF2Q12905 390 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms