RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ZYG11AQ6WRX3 759 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 SRRM1Q8IYB3 904 aaKnown RBP19.27■□□□□ 0.68
SKA3-205ENST00000465471 OR7G3Q8NG95 312 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 OR52B6Q8NGF0 335 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 ZNF473Q8WTR7 871 aaKnown RBP19.27■□□□□ 0.68
SKA3-205ENST00000465471 TTC9Q92623 222 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 COL26A1Q96A83 441 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 L3HYPDHQ96EM0 354 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 CATSPER2Q96P56 530 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 TGIF2Q9GZN2 237 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 KLHL31Q9H511 634 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 NOL11Q9H8H0 719 aaKnown RBP19.27■□□□□ 0.68
SKA3-205ENST00000465471 ACTR8Q9H981 624 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 ANKHQ9HCJ1 492 aa19.27■□□□□ 0.68
SKA3-205ENST00000465471 ZNF282Q9UDV7 671 aaPredicted RBP19.27■□□□□ 0.68
SKA3-205ENST00000465471 PTRH2Q9Y3E5 179 aaKnown RBP19.27■□□□□ 0.68
SKA3-205ENST00000465471 SCN3AQ9NY46 2000 aa19.27■□□□□ 0.67
SKA3-205ENST00000465471 IGSF10Q6WRI0 2623 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 LRIT2A6NDA9 550 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 ANKDD1BA6NHY2 528 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 KLHL18O94889 574 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 ZNF888P0CJ79 500 aaPredicted RBP19.26■□□□□ 0.67
SKA3-205ENST00000465471 PRKAR1AP10644 381 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 IMPDH1P20839 514 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 SERPINB1P30740 379 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 HNRNPH1P31943 449 aaKnown RBP19.26■□□□□ 0.67
SKA3-205ENST00000465471 FOLR3P41439 243 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 RHDQ02161 417 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 GGTA1PQ4G0N0 100 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 UNC50Q53HI1 259 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 NIPAL1Q6NVV3 410 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 RPS27LQ71UM5 84 aaKnown RBP19.26■□□□□ 0.67
SKA3-205ENST00000465471 ABHD13Q7L211 337 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 RDH11Q8TC12 318 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 STT3BQ8TCJ2 826 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 GAL3ST3Q96A11 431 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 MS4A6EQ96DS6 147 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 C12orf65Q9H3J6 166 aaKnown RBP19.26■□□□□ 0.67
SKA3-205ENST00000465471 MKKSQ9NPJ1 570 aaPredicted RBP19.26■□□□□ 0.67
SKA3-205ENST00000465471 PLLPQ9Y342 182 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 NAALAD2Q9Y3Q0 740 aa19.26■□□□□ 0.67
SKA3-205ENST00000465471 NUP210LQ5VU65 1888 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 CDC14CA4D256 554 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 URADA6NGE7 173 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 SGK494L7N484 410 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 CLDN9O95484 217 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 STXBP1P61764 594 aaKnown RBP19.25■□□□□ 0.67
SKA3-205ENST00000465471 SSPNQ14714 243 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 SYT16Q17RD7 645 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 TOR1AIP1Q5JTV8 583 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 ZC3H7AQ8IWR0 971 aaKnown RBP19.25■□□□□ 0.67
SKA3-205ENST00000465471 CCDC126Q96EE4 140 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 MS4A8Q9BY19 250 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 SEMA4BQ9NPR2 832 aaPredicted RBP19.25■□□□□ 0.67
SKA3-205ENST00000465471 C14orf105Q9NVL8 296 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 SENP1Q9P0U3 644 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 TRPC4Q9UBN4 977 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 ADGRE2Q9UHX3 823 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 RNF11Q9Y3C5 154 aa19.25■□□□□ 0.67
SKA3-205ENST00000465471 A0A1B0GTL3 188 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 PPP6CO00743 305 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 RDH16O75452 317 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 ZGLP1P0C6A0 271 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 ATXN8OSP0DMR3 200 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 MYL2P10916 166 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 PIK3CBP42338 1070 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 CCNG1P51959 295 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 MAT1AQ00266 395 aaKnown RBP19.24■□□□□ 0.67
SKA3-205ENST00000465471 TBR1Q16650 682 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 DEFB134Q4QY38 66 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 VWA2Q5GFL6 755 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 CEP85LQ5SZL2 805 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 CROCCP2Q86T23 111 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 SHISA5Q8N114 240 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 WDR20Q8TBZ3 569 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 THAP4Q8WY91 577 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 NACC2Q96BF6 587 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 CDK15Q96Q40 435 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 CLK4Q9HAZ1 481 aaKnown RBP19.24■□□□□ 0.67
SKA3-205ENST00000465471 ZNF225Q9UK10 706 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 POLHQ9Y253 713 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 PCDHGA11Q9Y5H2 935 aa19.24■□□□□ 0.67
SKA3-205ENST00000465471 ERVH48-1M5A8F1 160 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 FFAR3O14843 346 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 RGS16O15492 202 aaPredicted RBP19.23■□□□□ 0.67
SKA3-205ENST00000465471 GPR42O15529 346 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 TYROBPO43914 113 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 B3GALT4O96024 378 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 OTCP00480 354 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 CREB1P16220 341 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 HPDP32754 393 aaPredicted RBP19.23■□□□□ 0.67
SKA3-205ENST00000465471 CDH13P55290 713 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 DNAJB13P59910 316 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 RAB8AP61006 207 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 SKP1P63208 163 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 OCA2Q04671 838 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 CLCQ05315 142 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 KLC1Q07866 573 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 PCSK4Q6UW60 755 aa19.23■□□□□ 0.67
SKA3-205ENST00000465471 PPP1R32Q7Z5V6 425 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms