RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 USP24Q9UPU5 2620 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 A0A088AWK7 358 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 AGPSO00116 658 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 FOXE1O00358 373 aaPredicted RBP16.09■□□□□ 0.17
USP39-211ENST00000465282 SMIM10L1P0DMW3 83 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 ITGAXP20702 1163 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 ZNF10P21506 573 aaPredicted RBP16.09■□□□□ 0.17
USP39-211ENST00000465282 FBLP22087 321 aaKnown RBP16.09■□□□□ 0.17
USP39-211ENST00000465282 ETV4P43268 484 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 ARFIP1P53367 373 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 CYP4F2P78329 520 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 ZNF33BQ06732 778 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 HYAL2Q12891 473 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 CPSF6Q16630 551 aaKnown RBP eCLIP16.09■□□□□ 0.17
USP39-211ENST00000465282 TMEM35AQ53FP2 167 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 LCN10Q6JVE6 187 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 MRPL14Q6P1L8 145 aaKnown RBP16.09■□□□□ 0.17
USP39-211ENST00000465282 FRMD7Q6ZUT3 714 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 CHSY3Q70JA7 882 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 VN1R5Q7Z5H4 357 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 SYVN1Q86TM6 617 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 VASH2Q86V25 355 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 C10orf107Q8IVU9 208 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 CCNYL1Q8N7R7 359 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 OR2L5Q8NG80 312 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 OR4F6Q8NGB9 312 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 UTP15Q8TED0 518 aaKnown RBP16.09■□□□□ 0.17
USP39-211ENST00000465282 TRPC4APQ8TEL6 797 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 ZNF473Q8WTR7 871 aaKnown RBP16.09■□□□□ 0.17
USP39-211ENST00000465282 CCT6BQ92526 530 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 GAL3ST3Q96A11 431 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 COL26A1Q96A83 441 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 TLCD1Q96CP7 247 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 MOCOSQ96EN8 888 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 RNF31Q96EP0 1072 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 MMABQ96EY8 250 aaPredicted RBP16.09■□□□□ 0.17
USP39-211ENST00000465282 CMTM7Q96FZ5 175 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 SMIM10Q96HG1 83 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 CNDP1Q96KN2 507 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 MACROD1Q9BQ69 325 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 C12orf65Q9H3J6 166 aaKnown RBP16.09■□□□□ 0.17
USP39-211ENST00000465282 GSTO2Q9H4Y5 243 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 WDR70Q9NW82 654 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 ZNF282Q9UDV7 671 aaPredicted RBP16.09■□□□□ 0.17
USP39-211ENST00000465282 TRPS1Q9UHF7 1281 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 MAP4K5Q9Y4K4 846 aa16.09■□□□□ 0.17
USP39-211ENST00000465282 IGLV3-12A0A075B6K2 115 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 A0A0A6YYC8 382 aaPredicted RBP16.08■□□□□ 0.16
USP39-211ENST00000465282 ZNF891A8MT65 544 aaPredicted RBP16.08■□□□□ 0.16
USP39-211ENST00000465282 I3L1I5 382 aaPredicted RBP16.08■□□□□ 0.16
USP39-211ENST00000465282 K7ENP7 123 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 BIRC5O15392 142 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 ESRRBO95718 433 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 ENO1P06733 434 aaKnown RBP16.08■□□□□ 0.16
USP39-211ENST00000465282 PCNAP12004 261 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 IL10P22301 178 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 F8A1P23610 371 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 PTX3P26022 381 aaPredicted RBP16.08■□□□□ 0.16
USP39-211ENST00000465282 ITPKBP27987 946 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 SERPINB5P36952 375 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 OR1D4P47884 311 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 OCA2Q04671 838 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 VAC14Q08AM6 782 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 IFT88Q13099 833 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 ZRSR2Q15696 482 aaKnown RBP16.08■□□□□ 0.16
USP39-211ENST00000465282 ARHGAP40Q5TG30 622 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 MLIPQ5VWP3 458 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 FRG2Q64ET8 278 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 TRIM40Q6P9F5 258 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 INO80CQ6PI98 192 aaPredicted RBP16.08■□□□□ 0.16
USP39-211ENST00000465282 GPRIN3Q6ZVF9 776 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 GOLGA6L1Q8N7Z2 621 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 ENDOVQ8N8Q3 282 aaKnown RBP16.08■□□□□ 0.16
USP39-211ENST00000465282 HUS1BQ8NHY5 278 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 WDR20Q8TBZ3 569 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 NACC2Q96BF6 587 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 MS4A6EQ96DS6 147 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 FRG2BQ96QU4 278 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 CENPKQ9BS16 269 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 MS4A8Q9BY19 250 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 SLC29A3Q9BZD2 475 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 TGIF2Q9GZN2 237 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 ROGDIQ9GZN7 287 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 REXO4Q9GZR2 422 aaKnown RBP16.08■□□□□ 0.16
USP39-211ENST00000465282 KCNK9Q9NPC2 374 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 MKKSQ9NPJ1 570 aaPredicted RBP16.08■□□□□ 0.16
USP39-211ENST00000465282 SLC22A11Q9NSA0 550 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 TCFL5Q9UL49 500 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 SNX6Q9UNH7 406 aa16.08■□□□□ 0.16
USP39-211ENST00000465282 PTPRQQ9UMZ3 2332 aa16.07■□□□□ 0.16
USP39-211ENST00000465282 VSTM2BA6NLU5 285 aa16.07■□□□□ 0.16
USP39-211ENST00000465282 EFSO43281 561 aa16.07■□□□□ 0.16
USP39-211ENST00000465282 GALR3O60755 368 aaPredicted RBP16.07■□□□□ 0.16
USP39-211ENST00000465282 CREG1O75629 220 aa16.07■□□□□ 0.16
USP39-211ENST00000465282 KLHL18O94889 574 aa16.07■□□□□ 0.16
USP39-211ENST00000465282 KRT6AP02538 564 aa16.07■□□□□ 0.16
USP39-211ENST00000465282 STATHP02808 62 aa16.07■□□□□ 0.16
USP39-211ENST00000465282 KRT6BP04259 564 aa16.07■□□□□ 0.16
USP39-211ENST00000465282 BPGMP07738 259 aa16.07■□□□□ 0.16
USP39-211ENST00000465282 ZNF888P0CJ79 500 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms