RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 RGS16O15492 202 aaPredicted RBP16.83■□□□□ 0.28
COL7A1-205ENST00000465238 LCMT2O60294 686 aaKnown RBP16.83■□□□□ 0.28
COL7A1-205ENST00000465238 AGFG2O95081 481 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 SBK3P0C264 359 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 EEF1DP29692 281 aaKnown RBP16.83■□□□□ 0.28
COL7A1-205ENST00000465238 CRHR1P34998 444 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 BCL6P41182 706 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 PIK3CGP48736 1102 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 REEP5Q00765 189 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 IRF8Q02556 426 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 RBBP5Q15291 538 aaKnown RBP16.83■□□□□ 0.28
COL7A1-205ENST00000465238 NKAIN1Q4KMZ8 207 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 XKR6Q5GH73 641 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 DCAF10Q5QP82 559 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 CEP85LQ5SZL2 805 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 HIVEP3Q5T1R4 2406 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 MRPL14Q6P1L8 145 aaKnown RBP16.83■□□□□ 0.28
COL7A1-205ENST00000465238 METTL2BQ6P1Q9 378 aaKnown RBP16.83■□□□□ 0.28
COL7A1-205ENST00000465238 LRIG3Q6UXM1 1119 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 SRRM1Q8IYB3 904 aaKnown RBP16.83■□□□□ 0.28
COL7A1-205ENST00000465238 KRT78Q8N1N4 520 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 TMEM151AQ8N4L1 468 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 CAMKVQ8NCB2 501 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 ZIM3Q96PE6 472 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 SARGQ9BW04 601 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 MFRPQ9BY79 579 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 SLC29A3Q9BZD2 475 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 EHD1Q9H4M9 534 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 TEX15Q9BXT5 2789 aa16.83■□□□□ 0.28
COL7A1-205ENST00000465238 LRRC14BA6NHZ5 514 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 DSCR3O14972 297 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 SIX3O95343 332 aaPredicted RBP16.82■□□□□ 0.28
COL7A1-205ENST00000465238 ALPPP05187 535 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 SCTRP47872 440 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 EMP3P54852 163 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 SLC18A2Q05940 514 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 CHIT1Q13231 466 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 LAPTM5Q13571 262 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 RAPSNQ13702 412 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 GTF2H2Q13888 395 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 SLBPQ14493 270 aaKnown RBP eCLIP16.82■□□□□ 0.28
COL7A1-205ENST00000465238 MYBPC3Q14896 1274 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 HIST2H2ACQ16777 129 aaPredicted RBP16.82■□□□□ 0.28
COL7A1-205ENST00000465238 MUM1Q2TAK8 710 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 PRTGQ2VWP7 1150 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 CCDC153Q494R4 210 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 HIST2H2AA3Q6FI13 130 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 GTF2H2CQ6P1K8 395 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 ASPGQ86U10 573 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 ZNF740Q8NDX6 193 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 MYRIPQ8NFW9 859 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 SLC13A3Q8WWT9 602 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 PTCD3Q96EY7 689 aaKnown RBP16.82■□□□□ 0.28
COL7A1-205ENST00000465238 EFCAB11Q9BUY7 163 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 IQCGQ9H095 443 aaKnown RBP16.82■□□□□ 0.28
COL7A1-205ENST00000465238 CENPHQ9H3R5 247 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 SYNPO2LQ9H987 977 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 ARGLU1Q9NWB6 273 aaPredicted RBP16.82■□□□□ 0.28
COL7A1-205ENST00000465238 P4HTMQ9NXG6 502 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 LUZP4Q9P127 313 aa16.82■□□□□ 0.28
COL7A1-205ENST00000465238 RUVBL1Q9Y265 456 aaKnown RBP16.82■□□□□ 0.28
COL7A1-205ENST00000465238 UNC79Q9P2D8 2635 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 A0A1B0GX78 115 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 A8MT66 165 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 STATHP02808 62 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 SERPIND1P05546 499 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 SLC35G6P0C7Q6 338 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 ATP5F1P24539 256 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-205ENST00000465238 AHRP35869 848 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 GCGRP47871 477 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 DOC2AQ14183 400 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 SLC9A5Q14940 896 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 NDUFA9Q16795 377 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 HKDC1Q2TB90 917 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 PRR30Q53SZ7 412 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-205ENST00000465238 PAGE2BQ5JRK9 111 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 GARNL3Q5VVW2 1013 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 TMIGD1Q6UXZ0 262 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 VN1R4Q7Z5H5 301 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 SLC22A9Q8IVM8 553 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 GALNT16Q8N428 558 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 CCDC63Q8NA47 563 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 NACC2Q96BF6 587 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 TM4SF19Q96DZ7 209 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 WDR34Q96EX3 536 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 SMC6Q96SB8 1091 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 PITHD1Q9GZP4 211 aaPredicted RBP16.81■□□□□ 0.28
COL7A1-205ENST00000465238 SPNS1Q9H2V7 528 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 NT5DC2Q9H857 520 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 IPPKQ9H8X2 491 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 SENP1Q9P0U3 644 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 ZFP69BQ9UJL9 534 aa16.81■□□□□ 0.28
COL7A1-205ENST00000465238 NUP210LQ5VU65 1888 aa16.8■□□□□ 0.28
COL7A1-205ENST00000465238 E2F3O00716 465 aa16.8■□□□□ 0.28
COL7A1-205ENST00000465238 P2RX6O15547 441 aa16.8■□□□□ 0.28
COL7A1-205ENST00000465238 DLX3O60479 287 aa16.8■□□□□ 0.28
COL7A1-205ENST00000465238 CNOT3O75175 753 aaKnown RBP16.8■□□□□ 0.28
COL7A1-205ENST00000465238 PROCP04070 461 aa16.8■□□□□ 0.28
COL7A1-205ENST00000465238 ATXN8OSP0DMR3 200 aa16.8■□□□□ 0.28
COL7A1-205ENST00000465238 MYL2P10916 166 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms