RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 HLCSP50747 726 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 ITGA8P53708 1063 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 OR4D2P58180 307 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 SLC26A5P58743 744 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 SEMA3AQ14563 771 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 TRIP13Q15645 432 aaPredicted RBP16.14■□□□□ 0.17
TOP3A-202ENST00000461127 CMPK2Q5EBM0 449 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 ARSKQ6UWY0 536 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 ZNF534Q76KX8 674 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 RPRMLQ8N4K4 120 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 C16orf52Q8NHV5 167 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 MBD6Q96DN6 1003 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 C18orf12Q96KH6 178 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 CATSPERZQ9NTU4 200 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.14■□□□□ 0.17
TOP3A-202ENST00000461127 ASIC3Q9UHC3 531 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 UTP11Q9Y3A2 253 aaKnown RBP16.14■□□□□ 0.17
TOP3A-202ENST00000461127 V9GYY5 206 aaPredicted RBP16.14■□□□□ 0.17
TOP3A-202ENST00000461127 CSPG4Q6UVK1 2322 aa16.14■□□□□ 0.17
TOP3A-202ENST00000461127 BCL6P41182 706 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 ZFP36L2P47974 494 aaKnown RBP16.13■□□□□ 0.17
TOP3A-202ENST00000461127 VPS41P49754 854 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 GDF10P55107 478 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 ABATP80404 500 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 SLC7A5Q01650 507 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 CLEC9AQ6UXN8 241 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 LDB1Q86U70 411 aaPredicted RBP16.13■□□□□ 0.17
TOP3A-202ENST00000461127 LRRC6Q86X45 466 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 SULF2Q8IWU5 870 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 PLPP5Q8NEB5 264 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 OR52K1Q8NGK4 314 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 ELP5Q8TE02 316 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 ANKHQ9HCJ1 492 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 FAM114A2Q9NRY5 505 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 PLSCR2Q9NRY7 297 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 RASSF1Q9NS23 344 aa16.13■□□□□ 0.17
TOP3A-202ENST00000461127 TSR3Q9UJK0 312 aaKnown RBP16.13■□□□□ 0.17
TOP3A-202ENST00000461127 SGK494L7N484 410 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 HAT1O14929 419 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 PEX1O43933 1283 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 PDE9AO76083 593 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 ETS1P14921 441 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 IL1RNP18510 177 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 IL10P22301 178 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 ADRA1DP25100 572 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 TRHRP34981 398 aaPredicted RBP16.12■□□□□ 0.17
TOP3A-202ENST00000461127 PEX19P40855 299 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 KIR2DL3P43628 341 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 MLF1P58340 268 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 GUCY2DQ02846 1103 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 ACVR1Q04771 509 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 C4orf22Q6V702 233 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 PRSS41Q7RTY9 318 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 ZNF227Q86WZ6 799 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 PLD3Q8IV08 490 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 PWWP2AQ96N64 755 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 ERP44Q9BS26 406 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 TRIM31Q9BZY9 425 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 PAK5Q9P286 719 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 ZNF407Q9C0G0 2248 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 SCN3AQ9NY46 2000 aa16.12■□□□□ 0.17
TOP3A-202ENST00000461127 FIGNL2A6NMB9 653 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 ERI2A8K979 691 aaKnown RBP16.11■□□□□ 0.17
TOP3A-202ENST00000461127 FAM171A2A8MVW0 826 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 MAGEB17A8MXT2 336 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 MYO1CO00159 1063 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 NDUFS3O75489 264 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 CDC123O75794 336 aaPredicted RBP16.11■□□□□ 0.17
TOP3A-202ENST00000461127 MATN4O95460 622 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 STATHP02808 62 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 INHBBP09529 407 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 ZSCAN5DPP0CG00 497 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 ACVR2AP27037 513 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 PNLIPRP1P54315 467 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 MPP1Q00013 466 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 RHAGQ02094 409 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 GPS1Q13098 491 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 ERCC6LQ2NKX8 1250 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 EMC4Q5J8M3 183 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 THEMIS2Q5TEJ8 643 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 PPP1R21Q6ZMI0 780 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 PRUNE1Q86TP1 453 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 CDC20BQ86Y33 519 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 KIF2BQ8N4N8 673 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 ZFP62Q8NB50 900 aaPredicted RBP16.11■□□□□ 0.17
TOP3A-202ENST00000461127 PEX13Q92968 403 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 OR1F2PQ96R84 312 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 MDFIQ99750 246 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 SMR3AQ99954 134 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 P2RY12Q9H244 342 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 DPH5Q9H2P9 285 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 ABCF3Q9NUQ8 709 aa16.11■□□□□ 0.17
TOP3A-202ENST00000461127 ARHGEF33A8MVX0 844 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 NPIPA2E9PIF3 369 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 NPIPA3F8WFD2 350 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 SMAPO00193 183 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 CD3EAPO15446 510 aaKnown RBP16.1■□□□□ 0.17
TOP3A-202ENST00000461127 CATP04040 527 aaKnown RBP16.1■□□□□ 0.17
TOP3A-202ENST00000461127 ATP5DP30049 168 aa16.1■□□□□ 0.17
TOP3A-202ENST00000461127 RPL22P35268 128 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms