RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CD1EP15812 388 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 ALDH4A1P30038 563 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 LSSP48449 732 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 IDH3AP50213 366 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 RPP38P78345 283 aaKnown RBP9.91□□□□□ -0.82
USP39-210ENST00000459775 IRF8Q02556 426 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 KIR2DS5Q14953 304 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 UNQ6494/PRO21346Q6UXR6 183 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 SLCO4C1Q6ZQN7 724 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 TMEM26Q6ZUK4 368 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 GALNT15Q8N3T1 639 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 MINDY1Q8N5J2 469 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 Q8N9G6 341 aaPredicted RBP9.91□□□□□ -0.82
USP39-210ENST00000459775 OR2L8Q8NGY9 312 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 METTL6Q8TCB7 284 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 C10orf82Q8WW14 230 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 SLC45A3Q96JT2 553 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 MARK4Q96L34 752 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 TRIM55Q9BYV6 548 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 EML4Q9HC35 981 aaKnown RBP9.91□□□□□ -0.82
USP39-210ENST00000459775 CHTOPQ9Y3Y2 248 aaKnown RBP9.91□□□□□ -0.82
USP39-210ENST00000459775 HEBP2Q9Y5Z4 205 aa9.91□□□□□ -0.82
USP39-210ENST00000459775 EBAG9O00559 213 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 PIP5K1BO14986 540 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 SIGLEC6O43699 453 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 PRICKLE3O43900 615 aaPredicted RBP9.9□□□□□ -0.82
USP39-210ENST00000459775 MLYCDO95822 493 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 OTCP00480 354 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 IDUAP35475 653 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 ARFIP1P53367 373 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 OR1D5P58170 312 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 DDX39BQ13838 428 aaKnown RBP9.9□□□□□ -0.82
USP39-210ENST00000459775 ABRAXAS2Q15018 415 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 SF1Q15637 639 aaKnown RBP9.9□□□□□ -0.82
USP39-210ENST00000459775 TUBB8Q3ZCM7 444 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 IGSF11Q5DX21 431 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 KANK2Q63ZY3 851 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 TMEM198Q66K66 360 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 DDIASQ8IXT1 998 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 GPR156Q8NFN8 814 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 OR2T11Q8NH01 316 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 FLVCR1-AS1Q8TAF5 88 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 TWIST2Q8WVJ9 160 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 SMPDL3AQ92484 453 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 SEC16BQ96JE7 1060 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 FCRL4Q96PJ5 515 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 MACROD1Q9BQ69 325 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 TRMOQ9BU70 441 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 EVA1BQ9NVM1 165 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 HRASLS2Q9NWW9 162 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 LRIT1Q9P2V4 623 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 HAO1Q9UJM8 370 aa9.9□□□□□ -0.82
USP39-210ENST00000459775 KCNE1BA0A087WTH5 132 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 ACACBO00763 2458 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 CLDN9O95484 217 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 ECDO95905 644 aaPredicted RBP9.89□□□□□ -0.83
USP39-210ENST00000459775 CBX5P45973 191 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 Q3ZCU0 254 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 AMZ1Q400G9 498 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 C14orf28Q4W4Y0 310 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 KRTCAP3Q53RY4 240 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 PLA2G2CQ5R387 149 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 C6orf132Q5T0Z8 1188 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.89□□□□□ -0.83
USP39-210ENST00000459775 C11orf88Q6PI97 169 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 OGFOD3Q6PK18 319 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 USP53Q70EK8 1073 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 ADCK2Q7Z695 626 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 C17orf82Q86X59 251 aaPredicted RBP9.89□□□□□ -0.83
USP39-210ENST00000459775 CLYBLQ8N0X4 340 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 CDC26Q8NHZ8 85 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 CEP76Q8TAP6 659 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 OR2A14Q96R47 310 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 MTERF1Q99551 399 aaKnown RBP9.89□□□□□ -0.83
USP39-210ENST00000459775 NTMT1Q9BV86 223 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 SLC6A20Q9NP91 592 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 POT1Q9NUX5 634 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 ZNF490Q9ULM2 529 aaPredicted RBP9.89□□□□□ -0.83
USP39-210ENST00000459775 C15orf41Q9Y2V0 281 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 KCNE2Q9Y6J6 123 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 TP53BP1Q12888 1972 aaPredicted RBP9.89□□□□□ -0.83
USP39-210ENST00000459775 DMXL1Q9Y485 3027 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 LY6G6EA0A0G2JKS1 128 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 CPED1A4D0V7 1026 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 SDHDO14521 159 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 KHNYNO15037 678 aaKnown RBP9.89□□□□□ -0.83
USP39-210ENST00000459775 LCMT2O60294 686 aaKnown RBP9.89□□□□□ -0.83
USP39-210ENST00000459775 SEC24DO94855 1032 aaPredicted RBP9.89□□□□□ -0.83
USP39-210ENST00000459775 KCNK5O95279 499 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 HGFP14210 728 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 GNAZP19086 355 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 PRKACBP22694 351 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 NDUFS1P28331 727 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 SHMT2P34897 504 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 SERPINB5P36952 375 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 HMGCS1Q01581 520 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 GALNT1Q10472 559 aaPredicted RBP9.89□□□□□ -0.83
USP39-210ENST00000459775 SLBPQ14493 270 aaKnown RBP eCLIP9.89□□□□□ -0.83
USP39-210ENST00000459775 ARHGAP19Q14CB8 494 aa9.89□□□□□ -0.83
USP39-210ENST00000459775 AARDQ4LEZ3 155 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms