RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 CEP68Q76N32 757 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 TMEM132CQ8N3T6 1108 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 OR7A2PQ8NGA2 310 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 BAHD1Q8TBE0 780 aaPredicted RBP23.31■■□□□ 1.32
U2AF1-204ENST00000459639 SLC38A3Q99624 504 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 PRPF18Q99633 342 aaKnown RBP23.31■■□□□ 1.32
U2AF1-204ENST00000459639 SORBS1Q9BX66 1292 aaKnown RBP23.31■■□□□ 1.32
U2AF1-204ENST00000459639 LHX9Q9NQ69 397 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 EVA1BQ9NVM1 165 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 FAM120CQ9NX05 1096 aaKnown RBP23.31■■□□□ 1.32
U2AF1-204ENST00000459639 SLAMF8Q9P0V8 285 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 SUCOQ9UBS9 1254 aaKnown RBP23.31■■□□□ 1.32
U2AF1-204ENST00000459639 CD300AQ9UGN4 299 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 ATP6V1HQ9UI12 483 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 PACSIN3Q9UKS6 424 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 PI4KAP42356 2102 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 ZDBF2Q9HCK1 2354 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 GPR37L1O60883 481 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 ENTPD5O75356 428 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 TYRP1P17643 537 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 CAPZBP47756 277 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 LSSP48449 732 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 HNRNPFP52597 415 aaKnown RBP23.3■■□□□ 1.32
U2AF1-204ENST00000459639 ZNF528Q3MIS6 628 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 FAM71E1Q6IPT2 247 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 UBE3DQ7Z6J8 389 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.3■■□□□ 1.32
U2AF1-204ENST00000459639 SLC15A3Q8IY34 581 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 KIAA2013Q8IYS2 634 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 PIGKQ92643 395 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 ITCHQ96J02 903 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 CGREF1Q99674 301 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 AICDAQ9GZX7 198 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 KCNH6Q9H252 994 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 RASSF4Q9H2L5 321 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 REEP4Q9H6H4 257 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 PILRAQ9UKJ1 303 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 PCDHA9Q9Y5H5 950 aa23.3■■□□□ 1.32
U2AF1-204ENST00000459639 ARHGAP10A1A4S6 786 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 RTCAO00442 366 aaKnown RBP23.29■■□□□ 1.32
U2AF1-204ENST00000459639 NME4O00746 187 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 HOXD12P35452 270 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 EPHA4P54764 986 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 TAS2R50P59544 299 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 BNIP3Q12983 259 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 SHBQ15464 509 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 C6orf10Q5SRN2 563 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 OR4C11Q6IEV9 310 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 OR4F3Q6IEY1 312 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 FBXO42Q6P3S6 717 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 VN1R4Q7Z5H5 301 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 R3HCC1LQ7Z5L2 792 aaKnown RBP23.29■■□□□ 1.32
U2AF1-204ENST00000459639 ASPGQ86U10 573 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 SLC25A45Q8N413 288 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 RNF148Q8N7C7 305 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 SRFBP1Q8NEF9 429 aaKnown RBP23.29■■□□□ 1.32
U2AF1-204ENST00000459639 NT5CQ8TCD5 201 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 TMEM125Q96AQ2 219 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 COQ8BQ96D53 544 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 MS4A6EQ96DS6 147 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 MTERF3Q96E29 417 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 SLC6A16Q9GZN6 736 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 DDX31Q9H8H2 851 aaKnown RBP23.29■■□□□ 1.32
U2AF1-204ENST00000459639 SYNPO2LQ9H987 977 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 SERHLQ9NQF3 203 aa23.29■■□□□ 1.32
U2AF1-204ENST00000459639 CTSVO60911 334 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 ERN1O75460 977 aaKnown RBP23.28■■□□□ 1.32
U2AF1-204ENST00000459639 PROS1P07225 676 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 MAPK12P53778 367 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 STXBP1P61764 594 aaKnown RBP23.28■■□□□ 1.32
U2AF1-204ENST00000459639 PDE7AQ13946 482 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 TOR1AIP1Q5JTV8 583 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 LRIF1Q5T3J3 769 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 CPTPQ5TA50 214 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 NANOGP8Q6NSW7 305 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 ARL10Q8N8L6 244 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 OR2L5Q8NG80 312 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 DNAJB14Q8TBM8 379 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 OR2A5Q96R48 311 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 ZFYVE21Q9BQ24 234 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 NANOGQ9H9S0 305 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 ZSCAN32Q9NX65 697 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 CMTM6Q9NX76 183 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 EXO1Q9UQ84 846 aaKnown RBP23.28■■□□□ 1.32
U2AF1-204ENST00000459639 A0A096LPI6 279 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 PRORSD1PA6NEY8 169 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 GABRR3A8MPY1 467 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 MAP3K7O43318 606 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 FURINP09958 794 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 PIM1P11309 404 aaPredicted RBP23.28■■□□□ 1.32
U2AF1-204ENST00000459639 TSFMP43897 325 aaKnown RBP23.28■■□□□ 1.32
U2AF1-204ENST00000459639 PPP1CAP62136 330 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 TRA2BP62995 288 aaKnown RBP23.28■■□□□ 1.32
U2AF1-204ENST00000459639 RGS1Q08116 209 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 C2orf80Q0P641 193 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 RNF44Q7L0R7 432 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 BMP8AQ7Z5Y6 402 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 RABEPKQ7Z6M1 372 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 OR8J3Q8NGG0 315 aa23.28■■□□□ 1.32
U2AF1-204ENST00000459639 JADE3Q92613 823 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms