RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 IRF9Q00978 393 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 TBCCQ15814 346 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 SYT16Q17RD7 645 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 DEFB134Q4QY38 66 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 ZC3H7AQ8IWR0 971 aaKnown RBP21.93■■□□□ 1.1
CBX3-204ENST00000456948 AFAP1L2Q8N4X5 818 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 UBTD2Q8WUN7 234 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 ISL2Q96A47 359 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 ESAMQ96AP7 390 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 SCYL1Q96KG9 808 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 OR1F2PQ96R84 312 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 SMAD5Q99717 465 aaKnown RBP21.93■■□□□ 1.1
CBX3-204ENST00000456948 SPNS1Q9H2V7 528 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 HCN3Q9P1Z3 774 aa21.93■■□□□ 1.1
CBX3-204ENST00000456948 IQANK1A0A1B0GTG1 560 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 TRIM49D1C9J1S8 452 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 PSMD12O00232 456 aaPredicted RBP21.92■■□□□ 1.1
CBX3-204ENST00000456948 FFAR3O14843 346 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 GPR42O15529 346 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 ALOX12BO75342 701 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 RDH16O75452 317 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 CLEC3AO75596 197 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 ZNF888P0CJ79 500 aaPredicted RBP21.92■■□□□ 1.1
CBX3-204ENST00000456948 C8orf89P0DMQ9 161 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 JAK1P23458 1154 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 CASRP41180 1078 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 CSRP3P50461 194 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 CHIT1Q13231 466 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 PFKFB4Q16877 469 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 FBXO48Q5FWF7 155 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 METTL2BQ6P1Q9 378 aaKnown RBP21.92■■□□□ 1.1
CBX3-204ENST00000456948 ANKRD53Q8N9V6 530 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 DCAKDQ8WVC6 231 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 MOCOSQ96EN8 888 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 WDR34Q96EX3 536 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 NUDT9Q9BW91 350 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 SLC6A16Q9GZN6 736 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 RIC8BQ9NVN3 520 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 COPG2Q9UBF2 871 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 FETUBQ9UGM5 382 aa21.92■■□□□ 1.1
CBX3-204ENST00000456948 HELZ2Q9BYK8 2649 aaKnown RBP21.92■■□□□ 1.1
CBX3-204ENST00000456948 SMIM24O75264 130 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 NR1D1P20393 614 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 SERPINB1P30740 379 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 GMPRP36959 345 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 HNF4AP41235 474 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 AGTR2P50052 363 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 DOC2AQ14183 400 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 TOR1AIP1Q5JTV8 583 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 UBAP2Q5T6F2 1119 aaKnown RBP21.91■■□□□ 1.1
CBX3-204ENST00000456948 AGAP7PQ5VUJ5 663 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 PRSS41Q7RTY9 318 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 KBTBD2Q8IY47 623 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.91■■□□□ 1.1
CBX3-204ENST00000456948 UTP15Q8TED0 518 aaKnown RBP21.91■■□□□ 1.1
CBX3-204ENST00000456948 AGAP4Q96P64 663 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 TRIM4Q9C037 500 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 LHPPQ9H008 270 aa21.91■■□□□ 1.1
CBX3-204ENST00000456948 CPSF2Q9P2I0 782 aaKnown RBP21.91■■□□□ 1.1
CBX3-204ENST00000456948 K7EM74 188 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 CASP2P42575 452 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 MAGEA12P43365 314 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 RAPSNQ13702 412 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 SETDB1Q15047 1291 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 FAAH2Q6GMR7 532 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 ADGRD1Q6QNK2 874 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 PDSS2Q86YH6 399 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 PARP9Q8IXQ6 854 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 SRFBP1Q8NEF9 429 aaKnown RBP21.9■■□□□ 1.1
CBX3-204ENST00000456948 CREB3L4Q8TEY5 395 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 GAL3ST3Q96A11 431 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 TBC1D20Q96BZ9 403 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 PEX11GQ96HA9 241 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 ZNF160Q9HCG1 818 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 ADGRE2Q9UHX3 823 aa21.9■■□□□ 1.1
CBX3-204ENST00000456948 UQCRHP07919 91 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 RAB8AP61006 207 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 RCN2Q14257 317 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 SLC29A2Q14542 456 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 NAA30Q147X3 362 aaPredicted RBP21.89■■□□□ 1.09
CBX3-204ENST00000456948 MED27Q6P2C8 311 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 TRIM40Q6P9F5 258 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 TMEM205Q6UW68 189 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 LCA5Q86VQ0 697 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 ZADH2Q8N4Q0 377 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 TEX9Q8N6V9 391 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 C8orf44Q96CB5 159 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 THOC3Q96J01 351 aaKnown RBP21.89■■□□□ 1.09
CBX3-204ENST00000456948 TUBB6Q9BUF5 446 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 VN1R1Q9GZP7 353 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 RHBGQ9H310 441 aa21.89■■□□□ 1.09
CBX3-204ENST00000456948 LOC102723996A0A087X1L8 192 aa21.88■■□□□ 1.09
CBX3-204ENST00000456948 A0A1W2PQ72 361 aa21.88■■□□□ 1.09
CBX3-204ENST00000456948 LRIT2A6NDA9 550 aa21.88■■□□□ 1.09
CBX3-204ENST00000456948 ZNF860A6NHJ4 632 aa21.88■■□□□ 1.09
CBX3-204ENST00000456948 CHST10O43529 356 aa21.88■■□□□ 1.09
CBX3-204ENST00000456948 FHP07954 510 aa21.88■■□□□ 1.09
CBX3-204ENST00000456948 FAM153BP0C7A2 387 aa21.88■■□□□ 1.09
CBX3-204ENST00000456948 MTHFD2P13995 350 aa21.88■■□□□ 1.09
CBX3-204ENST00000456948 TNFRSF8P28908 595 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms