RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 GALPQ9UBC7 116 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 RNF6Q9Y252 685 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 DHRS7Q9Y394 339 aa13.38□□□□□ -0.27
LYSMD3-202ENST00000453259 NIPBLQ6KC79 2804 aaeCLIP13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 OR14I1A6ND48 311 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 FAM47E-STBD1D6RA91 191 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 ZWINTO95229 277 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 C8GP07360 202 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 ETS1P14921 441 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 FOSL1P15407 271 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 ALOX12P18054 663 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 MGAT1P26572 445 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 SNRPNP63162 240 aaKnown RBP13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 CMPK2Q5EBM0 449 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 ZNF468Q5VIY5 522 aaPredicted RBP13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 ZNF470Q6ECI4 717 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 LCTLQ6UWM7 567 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 ABHD13Q7L211 337 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 SLC26A11Q86WA9 606 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 TGIF2LYQ8IUE0 185 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 SULF2Q8IWU5 870 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 MARVELD2Q8N4S9 558 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 RNF214Q8ND24 703 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 ABHD11Q8NFV4 315 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 GIMAP7Q8NHV1 300 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 MAIP1Q8WWC4 291 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 C1orf54Q8WWF1 131 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 TSLPQ969D9 159 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 SGPP1Q9BX95 441 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 DEFB126Q9BYW3 111 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 ABCF3Q9NUQ8 709 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 SAMD15Q9P1V8 674 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 HCFC1P51610 2035 aa13.37□□□□□ -0.27
LYSMD3-202ENST00000453259 IGKV3D-11A0A0A0MRZ8 115 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 FAM237BA0A1B0GVD1 139 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 TCRBV16S1A1N1A0A5B0 115 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 CTAGE9A4FU28 777 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 OR2W5A6NFC9 320 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 URADA6NGE7 173 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 GOLGA8KD6RF30 607 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 GOLGA8TH3BQL2 631 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 ACOT7O00154 380 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 SLC16A5O15375 505 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 PEX1O43933 1283 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 CDC123O75794 336 aaPredicted RBP13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 NADKO95544 446 aaPredicted RBP13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 TUBB4AP04350 444 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 PPP2R2AP63151 447 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 RGS1Q08116 209 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 MYBPHQ13203 477 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 UGT3A1Q6NUS8 523 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 RAD9BQ6WBX8 426 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 CYHR1Q6ZMK1 362 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 CEP128Q6ZU80 1094 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 PALM2Q8IXS6 379 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 CYP4Z2PQ8N1L4 340 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 AMER2Q8N7J2 671 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 ZNF740Q8NDX6 193 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 ACRBPQ8NEB7 543 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 CD200R1Q8TD46 325 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 CALML6Q8TD86 181 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 CREB3L4Q8TEY5 395 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 SLC6A16Q9GZN6 736 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 TIMMDC1Q9NPL8 285 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 PRDM9Q9NQV7 894 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 PPIEQ9UNP9 301 aaKnown RBP13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 MED16Q9Y2X0 877 aa13.36□□□□□ -0.27
LYSMD3-202ENST00000453259 TRBC2A0A5B9 178 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 FIGNL2A6NMB9 653 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 BCKDKO14874 412 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 NDUFS4O43181 175 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 HS6ST1O60243 411 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 KLK8O60259 260 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 MLNP12872 115 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 HOXB4P17483 251 aaPredicted RBP13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 AHRP35869 848 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 COILP38432 576 aaPredicted RBP13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 MAGEA6P43360 314 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 RGS4P49798 205 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 CCR8P51685 355 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 CLCN2P51788 898 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 IST1P53990 364 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 SNX1Q13596 522 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 THOC5Q13769 683 aaKnown RBP13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 AGTRAPQ6RW13 159 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 GSTA5Q7RTV2 222 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 KIF2BQ8N4N8 673 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 TMEM156Q8N614 296 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 NFAM1Q8NET5 270 aaPredicted RBP13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 B3GNT7Q8NFL0 401 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 OR4K1Q8NGD4 311 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 NT5CQ8TCD5 201 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 SEC16BQ96JE7 1060 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 PTCHD1Q96NR3 888 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 SLC30A3Q99726 388 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 MACROD1Q9BQ69 325 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 RBCK1Q9BYM8 510 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 PARVBQ9HBI1 364 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 HOMER3Q9NSC5 361 aa13.35□□□□□ -0.27
LYSMD3-202ENST00000453259 MMACHCQ9Y4U1 282 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms