RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ZNF33BQ06732 778 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 CKAP4Q07065 602 aaKnown RBP14.4□□□□□ -0.1
CHD3-205ENST00000449744 TGFBIQ15582 683 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 NSDHLQ15738 373 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 EXT1Q16394 746 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 GRTP1Q5TC63 336 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 PLAG1Q6DJT9 500 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 RPUSD3Q6P087 351 aaKnown RBP14.4□□□□□ -0.1
CHD3-205ENST00000449744 SHISA5Q8N114 240 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 TCAIMQ8N3R3 496 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 SPATA6LQ8N4H0 392 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 ANKRD53Q8N9V6 530 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 PLPP5Q8NEB5 264 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 SUN3Q8TAQ9 357 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 FAR1Q8WVX9 515 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 TBC1D20Q96BZ9 403 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 LPAR4Q99677 370 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 GPR22Q99680 433 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 BARD1Q99728 777 aaKnown RBP14.4□□□□□ -0.1
CHD3-205ENST00000449744 CAPS2Q9BXY5 557 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 PHACTR1Q9C0D0 580 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 CNOT10Q9H9A5 744 aaKnown RBP14.4□□□□□ -0.1
CHD3-205ENST00000449744 STMN3Q9NZ72 180 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 WWOXQ9NZC7 414 aa14.4□□□□□ -0.1
CHD3-205ENST00000449744 FLNCQ14315 2725 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 MAGEB17A8MXT2 336 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 PSMD12O00232 456 aaPredicted RBP14.39□□□□□ -0.11
CHD3-205ENST00000449744 B4GALT2O60909 372 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 DDAH2O95865 285 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 B3GALT4O96024 378 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 F10P00742 488 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 S100BP04271 92 aaPredicted RBP14.39□□□□□ -0.11
CHD3-205ENST00000449744 FHP07954 510 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 MYBL2P10244 700 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 STX2P32856 288 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 MAGEA4P43358 317 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 TNFSF10P50591 281 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 GPX6P59796 221 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 RAB8AP61006 207 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 ABRAXAS2Q15018 415 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 C18orf21Q32NC0 220 aaPredicted RBP14.39□□□□□ -0.11
CHD3-205ENST00000449744 SFT2D3Q587I9 215 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 TOR1AIP1Q5JTV8 583 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 PAPD4Q6PIY7 484 aaKnown RBP14.39□□□□□ -0.11
CHD3-205ENST00000449744 GPSM1Q86YR5 675 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 KLHDC8AQ8IYD2 350 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 KRT78Q8N1N4 520 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 PPM1NQ8N819 430 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 ST6GALNAC3Q8NDV1 305 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 TTLQ8NG68 377 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 FBXO25Q8TCJ0 367 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 UTP15Q8TED0 518 aaKnown RBP14.39□□□□□ -0.11
CHD3-205ENST00000449744 CCT6BQ92526 530 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 SLC6A16Q9GZN6 736 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 CLK4Q9HAZ1 481 aaKnown RBP14.39□□□□□ -0.11
CHD3-205ENST00000449744 KCNK13Q9HB14 408 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 ABI3Q9P2A4 366 aa14.39□□□□□ -0.11
CHD3-205ENST00000449744 CLGNO14967 610 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 WISP3O95389 354 aaPredicted RBP14.38□□□□□ -0.11
CHD3-205ENST00000449744 WDPCPO95876 746 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 SERPINA6P08185 405 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 CD1DP15813 335 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 SLC6A12P48065 614 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 OR4D2P58180 307 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 RAB10P61026 200 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 STXBP1P61764 594 aaKnown RBP14.38□□□□□ -0.11
CHD3-205ENST00000449744 RHAGQ02094 409 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 SLBPQ14493 270 aaKnown RBP eCLIP14.38□□□□□ -0.11
CHD3-205ENST00000449744 SLMAPQ14BN4 828 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 KBTBD12Q3ZCT8 623 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 CDKL4Q5MAI5 379 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 SULT1C3Q6IMI6 304 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 TMIGD1Q6UXZ0 262 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 RAPH1Q70E73 1250 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 AMER2Q8N7J2 671 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 BCORP1Q8N888 145 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 M1APQ8TC57 530 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 TSLPQ969D9 159 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 FAR2Q96K12 515 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 ZNF354BQ96LW1 612 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 C5orf34Q96MH7 638 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 PTCHD1Q96NR3 888 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 RNF32Q9H0A6 362 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 RHBGQ9H310 441 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 LANCL2Q9NS86 450 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 OLAHQ9NV23 265 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 DNAJC11Q9NVH1 559 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 GPRC5BQ9NZH0 403 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 CD274Q9NZQ7 290 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 RNF112Q9ULX5 631 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 SLC5A6Q9Y289 635 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 CNTRLQ7Z7A1 2325 aa14.38□□□□□ -0.11
CHD3-205ENST00000449744 OR5H15A6NDH6 313 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 DNAJB6O75190 326 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 RNH1P13489 461 aaKnown RBP14.37□□□□□ -0.11
CHD3-205ENST00000449744 EDN3P14138 238 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 GSTM2P28161 218 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 HYAL2Q12891 473 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 NAB1Q13506 487 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 TRADDQ15628 312 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms