RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 HEATR1Q9H583 2144 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 A0A0G2JN53 185 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM72CH0Y354 149 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRIM38O00635 465 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCDC159P0C7I6 412 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 S100A3P33764 101 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 STC1P52823 247 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 CLNS1AP54105 237 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLBPQ14493 270 aaKnown RBP eCLIP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 GPNMBQ14956 572 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PDK4Q16654 411 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 KCTD19Q17RG1 926 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM72AQ5TYM5 149 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM72DQ6L9T8 149 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM72BQ86X60 149 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 C4orf33Q8N1A6 199 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 ACTRT1Q8TDG2 376 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 THAP4Q8WY91 577 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 RGMAQ96B86 450 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 SARAFQ96BY9 339 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 C1QTNF2Q9BXJ5 285 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 SHCBP1LQ9BZQ2 653 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 C1GALT1Q9NS00 363 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 NUDT4Q9NZJ9 180 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 QSER1Q2KHR3 1735 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PTPN13Q12923 2485 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 BLACEA4D250 179 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 NDUFAB1O14561 156 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PLRG1O43660 514 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 AHCYP23526 432 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 DNAJA1P31689 397 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 MSLNQ13421 630 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM225Q6GV28 225 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 AGTRAPQ6RW13 159 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 NAPRTQ6XQN6 538 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 RNF111Q6ZNA4 994 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 GPRIN3Q6ZVF9 776 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 GPAT4Q86UL3 456 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 CYP4Z1Q86W10 505 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC41A1Q8IVJ1 513 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 MCATQ8IVS2 390 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PLPP6Q8IY26 295 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 CYP4Z2PQ8N1L4 340 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 RIBC1Q8N443 379 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 SFRP1Q8N474 314 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PEX11GQ96HA9 241 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 POLDIP3Q9BY77 421 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PCDHB14Q9Y5E9 798 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 A0A0G2JND7 137 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 TRBV11-1A0A0K0K1C0 115 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 LNP1A1A4G5 178 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 NPIPB15A6NHN6 443 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM63AO94886 807 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZSCAN5DPP0CG00 497 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 FOXN2P32314 431 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC1A3P43003 542 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 GPR3P46089 330 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 HNMTP50135 292 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 WIPI1Q5MNZ9 446 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF648Q5T619 568 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 MBOAT1Q6ZNC8 495 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ABHD12BQ7Z5M8 362 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR1E3Q8WZA6 343 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 EXOSC8Q96B26 276 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 TCTN2Q96GX1 697 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 PAFAH2Q99487 392 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 RHNO1Q9BSD3 238 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 FGF22Q9HCT0 170 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC6A20Q9NP91 592 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 PRODH2Q9UF12 536 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF860A6NHJ4 632 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 H7BY64 318 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 PCDHGA12O60330 932 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SRPX2O60687 465 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 MTHFD1P11586 935 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 POU3F2P20265 443 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 JAM2P57087 298 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC10A1Q14973 349 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM71Q6P5X7 295 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMIGD1Q6UXZ0 262 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ARHGAP36Q6ZRI8 547 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 HSD11B1LQ7Z5J1 315 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 C3orf56Q8N813 242 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 KYQ8NBH2 561 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR5M9Q8NGP3 310 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 NANOS1Q8WY41 292 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 CMTM7Q96FZ5 175 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 PRAP1Q96NZ9 151 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 REXO4Q9GZR2 422 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZBTB20Q9HC78 741 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 KRT84Q9NSB2 600 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SCN2AQ99250 2005 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 CLDN9O95484 217 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 MAGP20916 626 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 SERPINB4P48594 390 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 PRR5P85299 388 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 MED21Q13503 144 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 TAZQ16635 292 aa5.41□□□□□ -1.54
CDC42BPA-209ENST00000448940 DEFB134Q4QY38 66 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms