RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 MAD2L1BPQ15013 274 aaPredicted RBP4.99□□□□□ -1.61
SCN11A-202ENST00000444237 PTGES3Q15185 160 aaKnown RBP4.99□□□□□ -1.61
SCN11A-202ENST00000444237 ZNF674Q2M3X9 581 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 SV2CQ496J9 727 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 RNF219Q5W0B1 726 aaPredicted RBP4.99□□□□□ -1.61
SCN11A-202ENST00000444237 USP7Q93009 1102 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 PIWIL1Q96J94 861 aaKnown RBP4.99□□□□□ -1.61
SCN11A-202ENST00000444237 AP1S3Q96PC3 154 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 SORT1Q99523 831 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 AIF1LQ9BQI0 150 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 TRAF4Q9BUZ4 470 aaPredicted RBP4.99□□□□□ -1.61
SCN11A-202ENST00000444237 STRA6Q9BX79 667 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 C1QTNF7Q9BXJ2 289 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 AP5M1Q9H0R1 490 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 PIGMQ9H3S5 423 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 KCNQ5Q9NR82 932 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 NUDT4Q9NZJ9 180 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 ZFR2Q9UPR6 939 aaKnown RBP4.99□□□□□ -1.61
SCN11A-202ENST00000444237 NOP16Q9Y3C1 178 aaKnown RBP4.99□□□□□ -1.61
SCN11A-202ENST00000444237 DYRK1BQ9Y463 629 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 PCDHGB1Q9Y5G3 927 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 CDH10Q9Y6N8 788 aa4.99□□□□□ -1.61
SCN11A-202ENST00000444237 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TRAV19A0A0A6YYK7 116 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LOC102723532A0A0G2JNH3 316 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LEUTXA8MZ59 168 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 D6RAR5 112 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 PHYHO14832 338 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SPATA31C1P0DKV0 1188 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 POU2F1P14859 743 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 AQP1P29972 269 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 VSX2P58304 361 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ATG9BQ674R7 924 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GTF2IRD2BQ6EKJ0 949 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 DOK6Q6PKX4 331 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ALKAL2Q6UX46 152 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TRIM46Q7Z4K8 759 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 B3GNT8Q7Z7M8 397 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GTF2IRD2Q86UP8 949 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 PYROXD2Q8N2H3 581 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TMEM151AQ8N4L1 468 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 OR10K1Q8NGX5 313 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 FCAMRQ8WWV6 532 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GIMAP5Q96F15 307 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 IL4I1Q96RQ9 567 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 OCSTAMPQ9BR26 566 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TMED9Q9BVK6 235 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SLAMF7Q9NQ25 335 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TRIM36Q9NQ86 728 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 PCDHA2Q9Y5H9 948 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 NUDT19A8MXV4 375 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 IMPA2O14732 288 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 NME6O75414 186 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 MATN4O95460 622 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 RAB3DO95716 219 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 STAU1O95793 577 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 IFNGP01579 166 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ALPLP05186 524 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GOT1P17174 413 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 NFYAP23511 347 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 PTBP1P26599 531 aaKnown RBP eCLIP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ADH6P28332 368 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GABRB3P28472 473 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ASMTP46597 345 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TAS2R43P59537 309 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ADARB1P78563 741 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 E2F1Q01094 437 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 EMX2Q04743 252 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 EXOSC2Q13868 293 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 RFTN2Q52LD8 501 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ZPBP2Q6X784 338 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SKA3Q8IX90 412 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LINC00471Q8N535 108 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 MFSD8Q8NHS3 518 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SPATA22Q8NHS9 363 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SETD7Q8WTS6 366 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SMAP2Q8WU79 429 aaPredicted RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TM9SF4Q92544 642 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TAAR8Q969N4 342 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 ELP4Q96EB1 424 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 CSPG4P5Q96PW8 444 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SAP130Q9H0E3 1048 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 RNF146Q9NTX7 359 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SLC25A13Q9UJS0 675 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 COQ4Q9Y3A0 265 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 GRXCR2A6NFK2 248 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 OR7A17O14581 309 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 NRP1O14786 923 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 LRRTM2O43300 516 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 YBX3P16989 372 aaKnown RBP eCLIP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 HK1P19367 917 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 DCTP40126 519 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 TTPAP49638 278 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 DLX5P56178 289 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 SRSF11Q05519 484 aaKnown RBP4.98□□□□□ -1.61
SCN11A-202ENST00000444237 FCN2Q15485 313 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 NDUFA9Q16795 377 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 C14orf28Q4W4Y0 310 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 CPTPQ5TA50 214 aa4.98□□□□□ -1.61
SCN11A-202ENST00000444237 CES5AQ6NT32 575 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms