RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ZNF682O95780 498 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 RBM34P42696 430 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PRPS1P60891 318 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 RPL38P63173 70 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SIRPB2Q5JXA9 342 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 VWA5B1Q5TIE3 1220 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 MAP1SQ66K74 1059 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 AGMOQ6ZNB7 445 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 MISPQ8IVT2 679 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 OR56A3Q8NH54 315 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 DNAJC1Q96KC8 554 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CHID1Q9BWS9 393 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 MFRPQ9BY79 579 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF408Q9H9D4 720 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SERHLQ9NQF3 203 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TDP1Q9NUW8 608 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SMPD4Q9NXE4 827 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CCDC167Q9P0B6 97 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SPASTQ9UBP0 616 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TBX21Q9UL17 535 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 A0A1W2PRQ8 180 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 METTL21EPA6NDL7 271 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF99A8MXY4 864 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SOX15O60248 233 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ATXN1LP0C7T5 689 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 IMPDH2P12268 514 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PORP16435 677 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CD247P20963 164 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CDH3P22223 829 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PRKAR1BP31321 381 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 GKP32189 559 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 DGCR6Q14129 220 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 DEPDC1Q5TB30 811 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 REP15Q6BDI9 236 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 UHMK1Q8TAS1 419 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PIH1D2Q8WWB5 315 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SMARCD2Q92925 531 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TM9SF2Q99805 663 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SEMA4BQ9NPR2 832 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PTGFRNQ9P2B2 879 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TRIM64A6NGJ6 449 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TNFRSF10BO14763 440 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 IGHA2P01877 340 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CD1AP06126 327 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 APEHP13798 732 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ATP12AP54707 1039 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 RHAGQ02094 409 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CRHR2Q13324 411 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 APOFQ13790 326 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SLC9A5Q14940 896 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ATAT1Q5SQI0 421 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CRTC3Q6UUV7 619 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 FGD2Q7Z6J4 655 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SERPINA9Q86WD7 417 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 FAM156AQ8NDB6 213 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ABHD11Q8NFV4 315 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TANKQ92844 425 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 FUBP1Q96AE4 644 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 POTEKPQ9BYX7 375 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PIGUQ9H490 435 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF385DQ9H6B1 395 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SCPEP1Q9HB40 452 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF391Q9UJN7 358 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TDRKHQ9Y2W6 561 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PCNX2A6NKB5 2137 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 HIVEP3Q5T1R4 2406 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 LINC01387J3KSC0 135 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PRLP01236 227 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 GM2AP17900 193 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CR2P20023 1033 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 RPS21P63220 83 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CTBP1Q13363 440 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 UAP1L1Q3KQV9 507 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 GPRC6AQ5T6X5 926 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 C16orf62Q7Z3J2 963 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 C12orf29Q8N999 325 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 GSTCDQ8NEC7 633 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TRAPPC12Q8WVT3 735 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 NUS1Q96E22 293 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TRNT1Q96Q11 434 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 JAM3Q9BX67 310 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 CLEC4MQ9H2X3 399 aaPredicted RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TPT1P8Q9HAU6 139 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 FBXL3Q9UKT7 428 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 IKZF3Q9UKT9 509 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TEX28O15482 410 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TGM6O95932 706 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 MT-ND5P03915 603 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF3P17036 446 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 AOAHP28039 575 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ST3GAL3Q11203 375 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 WSCD2Q2TBF2 565 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 C11orf91Q3C1V1 193 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SH3PXD2AQ5TCZ1 1133 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 SLC27A4Q6P1M0 643 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 TRMT10BQ6PF06 316 aaKnown RBP3.63□□□□□ -1.83
SHPRH-205ENST00000433355 NCEH1Q6PIU2 408 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 LYSMD3Q7Z3D4 306 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 PRICKLE2Q7Z3G6 844 aa3.63□□□□□ -1.83
SHPRH-205ENST00000433355 ASPGQ86U10 573 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms