RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 PIN1P1O15428 100 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 RRP8O43159 456 aaKnown RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 HOXC11O43248 304 aaPredicted RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 TSPAN1O60635 241 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 SH3BGRLO75368 114 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 ERAL1O75616 437 aaKnown RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 CEACAM4O75871 244 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 CDK2AP2O75956 126 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 KRT33AO76009 404 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 POP4O95707 220 aaKnown RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 MELTFP08582 738 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 SPARCP09486 303 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 VPREB1P12018 145 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 CYP2A7P20853 494 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 HOXD10P28358 340 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 CCR5P51681 352 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 MAZP56270 477 aaKnown RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 PRAMEP78395 509 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 PPP2R2BQ00005 443 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 SGCGQ13326 291 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 EIF4A2Q14240 407 aaKnown RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 KRT33BQ14525 404 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 TNIP1Q15025 636 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 SF3A2Q15428 464 aaKnown RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 PRICKLE4Q2TBC4 344 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 RNF212Q495C1 297 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 MDH1BQ5I0G3 518 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 RARS2Q5T160 578 aaKnown RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 TMEM154Q6P9G4 183 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 IGFL3Q6UXB1 125 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 TMUB2Q71RG4 321 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 ATG9AQ7Z3C6 839 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 FAM131BQ86XD5 332 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 CATSPER3Q86XQ3 398 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 ARHGAP12Q8IWW6 846 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 FRMD1Q8N878 549 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 RNF128Q8TEB7 428 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 PHLDA1Q8WV24 401 aaPredicted RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 HTRA1Q92743 480 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 MAELQ96JY0 434 aaKnown RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 EGLN2Q96KS0 407 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 SCLT1Q96NL6 688 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 ABHD6Q9BV23 337 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 NUP85Q9BW27 656 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 HOXD1Q9GZZ0 328 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 WNT5BQ9H1J7 359 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 TMEM245Q9H330 911 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 SH2D4AQ9H788 454 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 SDR39U1Q9NRG7 319 aaPredicted RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 PANK4Q9NVE7 773 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 TAB2Q9NYJ8 693 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 NOL12Q9UGY1 213 aaKnown RBP eCLIP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 MKLN1Q9UL63 735 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 RAB23Q9ULC3 237 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 NENFQ9UMX5 172 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 B3GALT5Q9Y2C3 310 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 ZNF510Q9Y2H8 683 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 PCDHGB3Q9Y5G1 929 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 SELENOKQ9Y6D0 94 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 COMMD10Q9Y6G5 202 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 CAPN7Q9Y6W3 813 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 SEC23IPQ9Y6Y8 1000 aaKnown RBP0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 KIF25-AS1Q9Y6Z4 181 aa0.9□□□□□ -2.27
HMGN1P33-201ENST00000432945 KDM3AQ9Y4C1 1321 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 KIF27Q86VH2 1401 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ASCC3Q8N3C0 2202 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 IGHV4-30-2A0A087WSY4 118 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 TMEM129A0AVI4 362 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 C2orf81A6NN90 581 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 TRAFD1O14545 582 aaPredicted RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 PLPP2O43688 288 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 SSX4O60224 188 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 HS6ST1O60243 411 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 GALR3O60755 368 aaPredicted RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 GCNT3O95395 438 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 SEC24AO95486 1093 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 MLYCDO95822 493 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 LY6G6DO95868 133 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 SRPRAP08240 638 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ZNF806P0C7X5 589 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 IGHV4-31P0DP07 118 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 FOLR2P14207 255 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 MYOGP15173 224 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 CDH3P22223 829 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 PSMA4P25789 261 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 LEPRP48357 1165 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 TRAPPC10P48553 1259 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 GALCP54803 685 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 TRA2BP62995 288 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 MYL7Q01449 175 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ODF4Q2M2E3 257 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 EIPR1Q53HC9 387 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 PRR30Q53SZ7 412 aaPredicted RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 ELFN2Q5R3F8 820 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 LRIF1Q5T3J3 769 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 KHDRBS2Q5VWX1 349 aaKnown RBP0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 CES4AQ5XG92 561 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 KRT79Q5XKE5 535 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 SLC25A47Q6Q0C1 308 aa0.89□□□□□ -2.27
HMGN1P33-201ENST00000432945 CEACAM19Q7Z692 300 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms