RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SKILP12757 684 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 SH3BGRP55822 239 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 CBX1P83916 185 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 GOLGA8DPQ0D2H9 430 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 ITGA9Q13797 1035 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 TFDP1Q14186 410 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 MXD4Q14582 209 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 KIAA1644Q3SXP7 199 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 FAM78AQ5JUQ0 283 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 C20orf194Q5TEA3 1177 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 NDUFAF5Q5TEU4 345 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 SASS6Q6UVJ0 657 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 VITQ6UXI7 678 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 TMTC3Q6ZXV5 915 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 OTUD6AQ7L8S5 288 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 MIER3Q7Z3K6 550 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 MAPK1IP1LQ8NDC0 245 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 CCDC26Q8TAB7 109 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 ETNPPLQ8TBG4 499 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 PRPF31Q8WWY3 499 aaKnown RBP4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 CRYGNQ8WXF5 182 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 ANKRD9Q96BM1 317 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 MPP4Q96JB8 637 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 ART5Q96L15 291 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 B3GALT6Q96L58 329 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 TEKT3Q9BXF9 490 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 RWDD1Q9H446 243 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 TRPV4Q9HBA0 871 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 EPB41L5Q9HCM4 733 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 C6orf50Q9HD87 102 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 MIOSQ9NXC5 875 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 BARHL2Q9NY43 387 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 RABL2BQ9UNT1 228 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 B3GALT5Q9Y2C3 310 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 TMEM184BQ9Y519 407 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 YIPF1Q9Y548 306 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 IKBKGQ9Y6K9 419 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 ITPR1Q14643 2758 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 ABCA7Q8IZY2 2146 aa4.37□□□□□ -1.71
HMGB3P5-201ENST00000428894 EML5Q05BV3 1969 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 LNP1A1A4G5 178 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 BCLAF3A2AJT9 711 aaKnown RBP4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 HEPACAM2A8MVW5 462 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 SPECC1L-ADORA2AF8WAN1 911 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 PLOD2O00469 737 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 CDX4O14627 284 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 PRRG1O14668 218 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 MAP2K7O14733 419 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 MSH4O15457 936 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZBTB43O43298 467 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 HCRTR2O43614 444 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 CHMP2AO43633 222 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 TPPPO94811 219 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 CEBPBP17676 345 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 FCARP24071 287 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 HRH2P25021 359 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 TRPC1P48995 793 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 LUMP51884 338 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 PSMC5P62195 406 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 FCHO2Q0JRZ9 810 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 LAMTOR4Q0VGL1 99 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 PRPF4BQ13523 1007 aaKnown RBP4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 BECN1Q14457 450 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZFP69Q49AA0 526 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 TPGS2Q68CL5 300 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 LMNTD2Q8IXW0 634 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 HDDC3Q8N4P3 179 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 FRMD1Q8N878 549 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 RNF149Q8NC42 400 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 DEFB124Q8NES8 71 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 ANKRD20A12PQ8NF67 263 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 EXOC6Q8TAG9 804 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 CEP170P1Q96L14 293 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 NUSAP1Q9BXS6 441 aaKnown RBP4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZMYND12Q9H0C1 365 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 MTRRQ9UBK8 725 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 ODF2LQ9ULJ1 636 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 NOL7Q9UMY1 257 aaKnown RBP4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 KCNE2Q9Y6J6 123 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 PRSS21Q9Y6M0 314 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 VWA8A3KMH1 1905 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 CELSR3Q9NYQ7 3312 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 GON4LQ3T8J9 2241 aa4.36□□□□□ -1.71
HMGB3P5-201ENST00000428894 ZNF638Q14966 1978 aaKnown RBP4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 TRIP11Q15643 1979 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 A0A1B0GUA9 196 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 ESYT2A0FGR8 921 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 TRIM64CA6NLI5 447 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 TMEM189-UBE2V1I3L0A0 370 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 SH2B2O14492 632 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 ADAM12O43184 909 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 TSPAN1O60635 241 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 B3GAT3O94766 335 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 APBB3O95704 486 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 FGF19O95750 216 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 ATP1A3P13637 1013 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 BSGP35613 385 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 PIK3CAP42336 1068 aa4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 QARSP47897 775 aaKnown RBP4.35□□□□□ -1.71
HMGB3P5-201ENST00000428894 ATXN3P54252 364 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms