RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PPA2Q9H2U2 334 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 ZNF304Q9HCX3 659 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 AASSQ9UDR5 926 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 A0A1B0GVI7 797 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 SERTM1A2A2V5 107 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 I3L521 148 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 ORC5O43913 435 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 ECI2O75521 394 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 FGF1P05230 155 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 CD96P40200 585 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 NDUFV1P49821 464 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 MAP2K6P52564 334 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 GAS1P54826 345 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 PUDPQ08623 228 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 NCF4Q15080 339 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 TEAD4Q15561 434 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 TSNQ15631 228 aaKnown RBP4.96□□□□□ -1.62
RIF1-203ENST00000428287 VMACQ2NL98 169 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 SPNS2Q8IVW8 549 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 ATP6V1C2Q8NEY4 427 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 OR7G3Q8NG95 312 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 OR11H4Q8NGC9 324 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 GGHQ92820 318 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 P2RY13Q9BPV8 354 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 CHCHD6Q9BRQ6 235 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 ZCCHC4Q9H5U6 513 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 WDCPQ9H6R7 721 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 AMBNQ9NP70 447 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 CYSLTR2Q9NS75 346 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 NDFIP2Q9NV92 336 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 CRYL1Q9Y2S2 319 aa4.96□□□□□ -1.62
RIF1-203ENST00000428287 LMO2P25791 158 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PNPLA4P41247 253 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 KCNQ1P51787 676 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 TPD52P55327 224 aaPredicted RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 SERINC3Q13530 473 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PLA1AQ53H76 456 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ANKS3Q6ZW76 656 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 RBP7Q96R05 134 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 OR5M11Q96RB7 305 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PELOQ9BRX2 385 aaKnown RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 ZSCAN5AQ9BUG6 496 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 KLHL42Q9P2K6 505 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ABCG2Q9UNQ0 655 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 FIS1Q9Y3D6 152 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ARVCFO00192 962 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 WNT10BO00744 389 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 BEST1O76090 585 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 MPC2O95563 127 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 SYN1P17600 705 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PCBP3P57721 371 aaKnown RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 ILKQ13418 452 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 LGALSLQ3ZCW2 172 aaPredicted RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 PTOV1Q86YD1 416 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PM20D2Q8IYS1 436 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PIAS4Q8N2W9 510 aaPredicted RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 EFHBQ8N7U6 833 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ATG16L2Q8NAA4 619 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 IPMKQ8NFU5 416 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 TRPM4Q8TD43 1214 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 GPR20Q99678 358 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 RC3H2Q9HBD1 1191 aaKnown RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 RASSF1Q9NS23 344 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ZNF70Q9UC06 446 aaPredicted RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 V9GYQ6 96 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 CYP17A1P05093 508 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PBX3P40426 434 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 DDI2Q5TDH0 399 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 FAM160B1Q5W0V3 765 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 GET4Q7L5D6 327 aaPredicted RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.95□□□□□ -1.621e-9■■■■□ 21.7
RIF1-203ENST00000428287 FGF11Q92914 225 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 UPRTQ96BW1 309 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 REG4Q9BYZ8 158 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 EVA1BQ9NVM1 165 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ERAP1Q9NZ08 941 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ARIH1Q9Y4X5 557 aaPredicted RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 CEP192Q8TEP8 1941 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 MALRD1Q5VYJ5 2156 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 HYKKA2RU49 373 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 RGS5O15539 181 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 SNAPC5O75971 98 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 WDR47O94967 919 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 NAT2P11245 290 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 BCKDHAP12694 445 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PTGS2P35354 604 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 BAG6P46379 1132 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 CLCNKAP51800 687 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PAMR1Q6UXH9 720 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ARIH2OSQ8N7S6 290 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 UQCC2Q9BRT2 126 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 FSD1LQ9BXM9 530 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 CHST8Q9H2A9 424 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 ANKRA2Q9H9E1 313 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 COPZ2Q9P299 210 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 PNMA8BQ9ULN7 279 aaPredicted RBP4.95□□□□□ -1.62
RIF1-203ENST00000428287 C2orf16Q68DN1 1984 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 LOC400499M0QZD8 3231 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 GNGT2O14610 69 aa4.95□□□□□ -1.62
RIF1-203ENST00000428287 IRAK2O43187 625 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms