RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 ENKD1Q9H0I2 346 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 CCDC68Q9H2F9 335 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 KLHL31Q9H511 634 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 LIN28AQ9H9Z2 209 aaKnown RBP7.59□□□□□ -1.19
VIM-202ENST00000421459 MCCC2Q9HCC0 563 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 LZTFL1Q9NQ48 299 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 NECTIN3Q9NQS3 549 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 IARS2Q9NSE4 1012 aaKnown RBP7.59□□□□□ -1.19
VIM-202ENST00000421459 SLC17A6Q9P2U8 582 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 IKZF3Q9UKT9 509 aa7.59□□□□□ -1.19
VIM-202ENST00000421459 FAM237BA0A1B0GVD1 139 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 PINLYPA6NC86 204 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 SDR42E2A6NKP2 422 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 FAM90A27PA6NNH2 459 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 E9PLN8 166 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 PRRG2O14669 202 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 PRKNO60260 465 aaPredicted RBP7.58□□□□□ -1.2
VIM-202ENST00000421459 TSPAN12O95859 305 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 KRT14P02533 472 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 TPOP07202 933 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 ENO3P13929 434 aaPredicted RBP7.58□□□□□ -1.2
VIM-202ENST00000421459 ZNF24P17028 368 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 PAMP19021 973 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 PPP2R1BP30154 601 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 MAGEA6P43360 314 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 CYB561P49447 251 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 MLF1P58340 268 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 RAB8AP61006 207 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 CDK16Q00536 496 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 CMPK2Q5EBM0 449 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 LCTLQ6UWM7 567 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 C4orf22Q6V702 233 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 PCGF5Q86SE9 256 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 CCDC71Q8IV32 467 aaPredicted RBP7.58□□□□□ -1.2
VIM-202ENST00000421459 AFAP1L2Q8N4X5 818 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 ACBD4Q8NC06 268 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 OR52N2Q8NGI0 321 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 CHTF18Q8WVB6 975 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 THAP11Q96EK4 314 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 C14orf79Q96F83 325 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 MS4A14Q96JA4 679 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 SERPINB12Q96P63 405 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 OLFM1Q99784 485 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 VKORC1Q9BQB6 163 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 SGPP1Q9BX95 441 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 AICDAQ9GZX7 198 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 DEFB127Q9H1M4 99 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 NPDC1Q9NQX5 325 aaPredicted RBP7.58□□□□□ -1.2
VIM-202ENST00000421459 DEPPQ9NTK1 212 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 SAMD15Q9P1V8 674 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 KLHL42Q9P2K6 505 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 TRMT6Q9UJA5 497 aaKnown RBP7.58□□□□□ -1.2
VIM-202ENST00000421459 FBXO5Q9UKT4 447 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 SLC22A7Q9Y694 548 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 MAD1L1Q9Y6D9 718 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 CNTRLQ7Z7A1 2325 aa7.58□□□□□ -1.2
VIM-202ENST00000421459 A0A0G2JN53 185 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 G3V3Y1 287 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 TGFBR3LH3BV60 316 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 TFECO14948 347 aaPredicted RBP7.57□□□□□ -1.2
VIM-202ENST00000421459 SLC16A5O15375 505 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 NRDCO43847 1150 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 PEX1O43933 1283 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 PRMT3O60678 531 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 MLYCDO95822 493 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 GUCA1CO95843 209 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 CYC1P08574 325 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 SLC35G6P0C7Q6 338 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 ALOX12P18054 663 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 TFEBP19484 476 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 HRH2P25021 359 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 PTGS2P35354 604 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 HLCSP50747 726 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 TAS2R50P59544 299 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 TFF3Q07654 80 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 DHX9Q08211 1270 aaKnown RBP7.57□□□□□ -1.2
VIM-202ENST00000421459 SNTB1Q13884 538 aaKnown RBP7.57□□□□□ -1.2
VIM-202ENST00000421459 HERC3Q15034 1050 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 EMC4Q5J8M3 183 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 UGT3A1Q6NUS8 523 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 SPNS3Q6ZMD2 512 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 TXLNBQ8N3L3 684 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 HORMAD2Q8N7B1 307 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 ANKRD53Q8N9V6 530 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 FAM98AQ8NCA5 519 aaKnown RBP7.57□□□□□ -1.2
VIM-202ENST00000421459 TMEM52Q8NDY8 209 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 OR4K1Q8NGD4 311 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 FAM57AQ8TBR7 257 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 UTP15Q8TED0 518 aaKnown RBP7.57□□□□□ -1.2
VIM-202ENST00000421459 PHF10Q8WUB8 498 aaKnown RBP7.57□□□□□ -1.2
VIM-202ENST00000421459 LINGO1Q96FE5 620 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 SNF8Q96H20 258 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 SIGLEC10Q96LC7 697 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 TSNARE1Q96NA8 513 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 OR1F2PQ96R84 312 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 TREX2Q9BQ50 279 aaPredicted RBP7.57□□□□□ -1.2
VIM-202ENST00000421459 PARVBQ9HBI1 364 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 ZFATQ9P243 1243 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 TNFRSF10DQ9UBN6 386 aa7.57□□□□□ -1.2
VIM-202ENST00000421459 ZNF223Q9UK11 482 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms