RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 MFAP5Q13361 173 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 SLBPQ14493 270 aaKnown RBP eCLIP14.46□□□□□ -0.09
NUP50-204ENST00000417702 PCOLCEQ15113 449 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 UAP1Q16222 522 aaPredicted RBP14.46□□□□□ -0.09
NUP50-204ENST00000417702 PRR30Q53SZ7 412 aaPredicted RBP14.46□□□□□ -0.09
NUP50-204ENST00000417702 TMIGD1Q6UXZ0 262 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 CCDC91Q7Z6B0 441 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 CISD2Q8N5K1 135 aaKnown RBP14.46□□□□□ -0.09
NUP50-204ENST00000417702 SNX31Q8N9S9 440 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 PDPRQ8NCN5 879 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 OR5T3Q8NGG3 340 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 BRIX1Q8TDN6 353 aaKnown RBP14.46□□□□□ -0.09
NUP50-204ENST00000417702 UTP15Q8TED0 518 aaKnown RBP14.46□□□□□ -0.09
NUP50-204ENST00000417702 IFT81Q8WYA0 676 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 EXT2Q93063 718 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 TBC1D20Q96BZ9 403 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 MRRFQ96E11 262 aaKnown RBP14.46□□□□□ -0.09
NUP50-204ENST00000417702 CNDP1Q96KN2 507 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 TMEM79Q9BSE2 394 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 SLC6A16Q9GZN6 736 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 PITHD1Q9GZP4 211 aaPredicted RBP14.46□□□□□ -0.09
NUP50-204ENST00000417702 ALG9Q9H6U8 611 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 CLK4Q9HAZ1 481 aaKnown RBP14.46□□□□□ -0.09
NUP50-204ENST00000417702 PTGFRNQ9P2B2 879 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 ACOT9Q9Y305 439 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 DOPEY2Q9Y3R5 2298 aa14.46□□□□□ -0.09
NUP50-204ENST00000417702 DYTNA2CJ06 578 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 CHST10O43529 356 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 ZNF500O60304 480 aaPredicted RBP14.45□□□□□ -0.1
NUP50-204ENST00000417702 CCNT2O60583 730 aaKnown RBP14.45□□□□□ -0.1
NUP50-204ENST00000417702 CDC123O75794 336 aaPredicted RBP14.45□□□□□ -0.1
NUP50-204ENST00000417702 FHP07954 510 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 TFEBP19484 476 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 JAK1P23458 1154 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 GSTM2P28161 218 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 RAB8AP61006 207 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 STXBP1P61764 594 aaKnown RBP14.45□□□□□ -0.1
NUP50-204ENST00000417702 ARG2P78540 354 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 TLR1Q15399 786 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 NSDHLQ15738 373 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 PDK4Q16654 411 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 FBXO48Q5FWF7 155 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 TOR1AIP1Q5JTV8 583 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 MROH9Q5TGP6 573 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 LANCL3Q6ZV70 420 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 ISCA2Q86U28 154 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 CUZD1Q86UP6 607 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 RELL1Q8IUW5 271 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.45□□□□□ -0.1
NUP50-204ENST00000417702 SIRT6Q8N6T7 355 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 PLPP5Q8NEB5 264 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 CCT6BQ92526 530 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 ESAMQ96AP7 390 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 SNRNP40Q96DI7 357 aaKnown RBP14.45□□□□□ -0.1
NUP50-204ENST00000417702 SEC16BQ96JE7 1060 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 IMMP1LQ96LU5 166 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 RBCK1Q9BYM8 510 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 EHD1Q9H4M9 534 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 NINJ2Q9NZG7 142 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 NUDT4Q9NZJ9 180 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 DMGDHQ9UI17 866 aaKnown RBP14.45□□□□□ -0.1
NUP50-204ENST00000417702 PTBP2Q9UKA9 531 aaKnown RBP14.45□□□□□ -0.1
NUP50-204ENST00000417702 SHANK1Q9Y566 2161 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 PCDHGA10Q9Y5H3 936 aa14.45□□□□□ -0.1
NUP50-204ENST00000417702 A0A087X1B8 175 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 IGHV3-20A0A0C4DH32 117 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 OR2W5A6NFC9 320 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 SUPT3HB4E1H0 165 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 PSMD12O00232 456 aaPredicted RBP14.44□□□□□ -0.1
NUP50-204ENST00000417702 KERAO60938 352 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 SUPT3HO75486 399 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 SEC24DO94855 1032 aaPredicted RBP14.44□□□□□ -0.1
NUP50-204ENST00000417702 B3GALT4O96024 378 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 GNLYP22749 145 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 HPDP32754 393 aaPredicted RBP14.44□□□□□ -0.1
NUP50-204ENST00000417702 EFNA3P52797 238 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 OLR1P78380 273 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 ACTN3Q08043 901 aaPredicted RBP14.44□□□□□ -0.1
NUP50-204ENST00000417702 BMPR2Q13873 1038 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 UBAP2LQ14157 1087 aaKnown RBP14.44□□□□□ -0.1
NUP50-204ENST00000417702 ZNF169Q14929 603 aaPredicted RBP14.44□□□□□ -0.1
NUP50-204ENST00000417702 ABRAXAS2Q15018 415 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 XKR6Q5GH73 641 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 PAGE2BQ5JRK9 111 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 LRRC70Q7Z2Q7 622 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 ANKRD37Q7Z713 158 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 SHISA5Q8N114 240 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 CREB3L4Q8TEY5 395 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 PSMF1Q92530 271 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 C19orf60Q96EN9 201 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 FAR2Q96K12 515 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 FMO2Q99518 471 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 EFCAB11Q9BUY7 163 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 KLHL31Q9H511 634 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 ACSS3Q9H6R3 686 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 NT5DC2Q9H857 520 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 PRM3Q9NNZ6 103 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 LANCL2Q9NS86 450 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 IGSF5Q9NSI5 407 aa14.44□□□□□ -0.1
NUP50-204ENST00000417702 TEKT2Q9UIF3 430 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms