RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 MVB12AQ96EY5 273 aa9.65□□□□□ -0.86
HDLBP-206ENST00000417540 THOC3Q96J01 351 aaKnown RBP9.65□□□□□ -0.86
HDLBP-206ENST00000417540 NSUN5Q96P11 429 aaKnown RBP9.65□□□□□ -0.86
HDLBP-206ENST00000417540 GPR78Q96P69 363 aa9.65□□□□□ -0.86
HDLBP-206ENST00000417540 NPAS2Q99743 824 aa9.65□□□□□ -0.86
HDLBP-206ENST00000417540 SARGQ9BW04 601 aa9.65□□□□□ -0.86
HDLBP-206ENST00000417540 FUT8Q9BYC5 575 aa9.65□□□□□ -0.86
HDLBP-206ENST00000417540 VPS11Q9H270 941 aa9.65□□□□□ -0.86
HDLBP-206ENST00000417540 RHBGQ9H310 441 aa9.65□□□□□ -0.86
HDLBP-206ENST00000417540 MKKSQ9NPJ1 570 aaPredicted RBP9.65□□□□□ -0.86
HDLBP-206ENST00000417540 SEMA3GQ9NS98 782 aa9.65□□□□□ -0.86
HDLBP-206ENST00000417540 DNAJC11Q9NVH1 559 aa9.65□□□□□ -0.86
HDLBP-206ENST00000417540 MTRF1LQ9UGC7 380 aaKnown RBP9.65□□□□□ -0.86
HDLBP-206ENST00000417540 NXT1Q9UKK6 140 aaKnown RBP9.65□□□□□ -0.86
HDLBP-206ENST00000417540 MKL2Q9ULH7 1088 aa9.65□□□□□ -0.86
HDLBP-206ENST00000417540 KCNE1BA0A087WTH5 132 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 A0A096LPK6 155 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 A0A1B0GTL3 188 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 MYOCOSA0A1B0GUC4 107 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 FAM227AF5H4B4 570 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 SAP18O00422 153 aaKnown RBP9.64□□□□□ -0.87
HDLBP-206ENST00000417540 PRKRAO75569 313 aaKnown RBP9.64□□□□□ -0.87
HDLBP-206ENST00000417540 HPP00738 406 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 MAOAP21397 527 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 SOX11P35716 441 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 AVPR1BP47901 424 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 PIK3CGP48736 1102 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 EMP2P54851 167 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 EMP3P54852 163 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 RRADP55042 308 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 FAM53BQ14153 422 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 DOC2AQ14183 400 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 ATG9BQ674R7 924 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 JMJD6Q6NYC1 403 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-206ENST00000417540 LRRC70Q7Z2Q7 622 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 ANKRD37Q7Z713 158 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 TBC1D1Q86TI0 1168 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-206ENST00000417540 RELL1Q8IUW5 271 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 CA13Q8N1Q1 262 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 KIF2BQ8N4N8 673 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 TEX19Q8NA77 164 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 KIF18AQ8NI77 898 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 TRIM44Q96DX7 344 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-206ENST00000417540 C19orf60Q96EN9 201 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 CNDP1Q96KN2 507 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 MAGEB10Q96LZ2 347 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-206ENST00000417540 FER1L6-AS2Q96M78 137 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 AIF1LQ9BQI0 150 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 TRIM54Q9BYV2 358 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 TXLNGYQ9BZA5 131 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 ANKHQ9HCJ1 492 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 PTGFRNQ9P2B2 879 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 CPSF2Q9P2I0 782 aaKnown RBP9.64□□□□□ -0.87
HDLBP-206ENST00000417540 ZFP69BQ9UJL9 534 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 ANAPC2Q9UJX6 822 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 PTBP2Q9UKA9 531 aaKnown RBP9.64□□□□□ -0.87
HDLBP-206ENST00000417540 EXPH5Q8NEV8 1989 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 HIVEP3Q5T1R4 2406 aa9.64□□□□□ -0.87
HDLBP-206ENST00000417540 LOC102723996A0A087X1L8 192 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 NSG1A0A0A6YYJ2 146 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 A0A1W2PQ72 361 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 TRIM49D1C9J1S8 452 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 H0YIG0 161 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 CLGNO14967 610 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 RIPK2O43353 540 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 ERI3O43414 337 aaKnown RBP9.63□□□□□ -0.87
HDLBP-206ENST00000417540 SHBGP04278 402 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 SBK3P0C264 359 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 PRR35P0CG20 571 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 C8orf89P0DMQ9 161 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 SFTPCP11686 197 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 ALOX12P18054 663 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 GRK3P35626 688 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 ATP6V0D1P61421 351 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 BTG2P78543 158 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 RELAQ04206 551 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 RGS1Q08116 209 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 AIMP2Q13155 320 aaKnown RBP9.63□□□□□ -0.87
HDLBP-206ENST00000417540 MRPL49Q13405 166 aaKnown RBP9.63□□□□□ -0.87
HDLBP-206ENST00000417540 DDX39BQ13838 428 aaKnown RBP9.63□□□□□ -0.87
HDLBP-206ENST00000417540 SETDB1Q15047 1291 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 NDUFA9Q16795 377 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 XKR6Q5GH73 641 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 SULT1C3Q6IMI6 304 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 TMEM205Q6UW68 189 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 CYS1Q717R9 158 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 GOLGA7Q7Z5G4 137 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 CLNKQ7Z7G1 428 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 PTGR2Q8N8N7 351 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-206ENST00000417540 MNS1Q8NEH6 495 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 ANKRD7Q92527 254 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 PSMF1Q92530 271 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 THAP11Q96EK4 314 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 CDK15Q96Q40 435 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 CYTH2Q99418 400 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 TGIF2Q9GZN2 237 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 NECTIN3Q9NQS3 549 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.63□□□□□ -0.87
HDLBP-206ENST00000417540 ZNF451Q9Y4E5 1061 aa9.63□□□□□ -0.87
HDLBP-206ENST00000417540 PCDHGA10Q9Y5H3 936 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms