RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 KLHL18O94889 574 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 ZGLP1P0C6A0 271 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 IL1RNP18510 177 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 JAK1P23458 1154 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 MMP11P24347 488 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 TSFMP43897 325 aaKnown RBP13.89□□□□□ -0.19
LIMS1-206ENST00000414829 CCR10P46092 362 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 ARFIP1P53367 373 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 ZNF844Q08AG5 666 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 RBBP7Q16576 425 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 LCN10Q6JVE6 187 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 SH2D5Q6ZV89 423 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 CHSY3Q70JA7 882 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 SRRM1Q8IYB3 904 aaKnown RBP13.89□□□□□ -0.19
LIMS1-206ENST00000414829 CYP4X1Q8N118 509 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 METTL27Q8N6F8 245 aaPredicted RBP13.89□□□□□ -0.19
LIMS1-206ENST00000414829 TMEM102Q8N9M5 508 aaPredicted RBP13.89□□□□□ -0.19
LIMS1-206ENST00000414829 KCT2Q8NC54 265 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 OR9A4Q8NGU2 314 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 STT3BQ8TCJ2 826 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 CREB3L4Q8TEY5 395 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 ZNF483Q8TF39 744 aaPredicted RBP13.89□□□□□ -0.19
LIMS1-206ENST00000414829 L3HYPDHQ96EM0 354 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 CMTM7Q96FZ5 175 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 FER1L6-AS2Q96M78 137 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 KCNC2Q96PR1 638 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 OR1F2PQ96R84 312 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 CRB3Q9BUF7 120 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 YIPF2Q9BWQ6 316 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 REXO4Q9GZR2 422 aaKnown RBP13.89□□□□□ -0.19
LIMS1-206ENST00000414829 NOL11Q9H8H0 719 aaKnown RBP13.89□□□□□ -0.19
LIMS1-206ENST00000414829 SYNPO2LQ9H987 977 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 COPS7BQ9H9Q2 264 aaPredicted RBP13.89□□□□□ -0.19
LIMS1-206ENST00000414829 SLC22A11Q9NSA0 550 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 PTPRQQ9UMZ3 2332 aa13.89□□□□□ -0.19
LIMS1-206ENST00000414829 CFAP47Q6ZTR5 3102 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 LRIT2A6NDA9 550 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 PSMD12O00232 456 aaPredicted RBP13.88□□□□□ -0.19
LIMS1-206ENST00000414829 NKX2-8O15522 239 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 ERI3O43414 337 aaKnown RBP13.88□□□□□ -0.19
LIMS1-206ENST00000414829 PLIN3O60664 434 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 GALR3O60755 368 aaPredicted RBP13.88□□□□□ -0.19
LIMS1-206ENST00000414829 SUPT7LO94864 414 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 PROCP04070 461 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 ZNF888P0CJ79 500 aaPredicted RBP13.88□□□□□ -0.19
LIMS1-206ENST00000414829 PCNAP12004 261 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 CD22P20273 847 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 IMPDH1P20839 514 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 RPS18P62269 152 aaKnown RBP13.88□□□□□ -0.19
LIMS1-206ENST00000414829 IFT88Q13099 833 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 ADPRMQ3LIE5 342 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 DEFB134Q4QY38 66 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 TOR1AIP1Q5JTV8 583 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 CFAP157Q5JU67 520 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 ZNF678Q5SXM1 525 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 MED25Q71SY5 747 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 C4orf33Q8N1A6 199 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 TMEM151AQ8N4L1 468 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 AMER3Q8N944 861 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 MYRIPQ8NFW9 859 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 OR2L5Q8NG80 312 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 OR7G3Q8NG95 312 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 UTP15Q8TED0 518 aaKnown RBP13.88□□□□□ -0.19
LIMS1-206ENST00000414829 SPSB2Q99619 263 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 NPLQ9BXD5 320 aaPredicted RBP13.88□□□□□ -0.19
LIMS1-206ENST00000414829 ADNPQ9H2P0 1102 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 TUBD1Q9UJT1 453 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 PPT2Q9UMR5 302 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 SNX6Q9UNH7 406 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 NAALAD2Q9Y3Q0 740 aa13.88□□□□□ -0.19
LIMS1-206ENST00000414829 FOXE1O00358 373 aaPredicted RBP13.87□□□□□ -0.19
LIMS1-206ENST00000414829 DLX3O60479 287 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 MED26O95402 600 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 STATHP02808 62 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 SBK3P0C264 359 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 CPA3P15088 417 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 OTX2P32243 289 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 PKNOX1P55347 436 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 DNAJB13P59910 316 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 AP2B1P63010 937 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 CLCQ05315 142 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 ZNF33BQ06732 778 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 LCP2Q13094 533 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 IL10RAQ13651 578 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 CEP85LQ5SZL2 805 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 FRG2Q64ET8 278 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 TTC19Q6DKK2 380 aaPredicted RBP13.87□□□□□ -0.19
LIMS1-206ENST00000414829 MILR1Q7Z6M3 343 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 MRGPREQ86SM8 312 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 APLFQ8IW19 511 aaPredicted RBP13.87□□□□□ -0.19
LIMS1-206ENST00000414829 IQCKQ8N0W5 287 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 BANPQ8N9N5 519 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 CLEC1AQ8NC01 280 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 C7orf57Q8NEG2 295 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 ADAMTS17Q8TE56 1095 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 PGM2Q96G03 612 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 TMEM237Q96Q45 408 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 FRG2BQ96QU4 278 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 ZNF382Q96SR6 550 aa13.87□□□□□ -0.19
LIMS1-206ENST00000414829 TRMOQ9BU70 441 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms