RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 JPH3Q8WXH2 748 aaPredicted RBP5.28□□□□□ -1.56
EPHA4-202ENST00000409854 COQ8BQ96D53 544 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 MTERF3Q96E29 417 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 ZNF764Q96H86 408 aaPredicted RBP5.28□□□□□ -1.56
EPHA4-202ENST00000409854 MPP4Q96JB8 637 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 CGREF1Q99674 301 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 DPH7Q9BTV6 452 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 PAIP1Q9H074 479 aaKnown RBP5.28□□□□□ -1.56
EPHA4-202ENST00000409854 ERVMER34-1Q9H9K5 563 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 LHX9Q9NQ69 397 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 FAM120CQ9NX05 1096 aaKnown RBP5.28□□□□□ -1.56
EPHA4-202ENST00000409854 ADA2Q9NZK5 511 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 WBP11Q9Y2W2 641 aaKnown RBP5.28□□□□□ -1.56
EPHA4-202ENST00000409854 PCDHGA2Q9Y5H1 932 aa5.28□□□□□ -1.56
EPHA4-202ENST00000409854 ADAMTS9Q9P2N4 1935 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 SPAG17Q6Q759 2223 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 A0A096LPI6 279 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 NDUFS4O43181 175 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 OR1F1O43749 312 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 TBX19O60806 448 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 DNAJA2O60884 412 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 ERN1O75460 977 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 KRT36O76013 467 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 S100A3P33764 101 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 CAPRIN1Q14444 709 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 MAPKAPK3Q16644 382 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 TMEM35AQ53FP2 167 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 FAM71E1Q6IPT2 247 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 NANOGP8Q6NSW7 305 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 OGFOD3Q6PK18 319 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 GPR155Q7Z3F1 870 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 UBE3DQ7Z6J8 389 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 SFTPA2Q8IWL1 248 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 MAML2Q8IZL2 1156 aaPredicted RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 ZNF548Q8NEK5 533 aaPredicted RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 GPR156Q8NFN8 814 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 CCDC124Q96CT7 223 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 OR52E6Q96RD3 313 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 MUC13Q9H3R2 512 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 SYNPO2LQ9H987 977 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 NANOGQ9H9S0 305 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 SLC25A37Q9NYZ2 338 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 ACTR10Q9NZ32 417 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 AHSPQ9NZD4 102 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 SPASTQ9UBP0 616 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 NKX1-2Q9UD57 310 aaPredicted RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 PACSIN3Q9UKS6 424 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 TECTAO75443 2155 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 CACNA1IQ9P0X4 2223 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 TRBV23OR9-2A0A075B6M9 112 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 LRIT2A6NDA9 550 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 ENO4A6NNW6 628 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 ISM1B1AKI9 464 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 BCAT2O15382 392 aaPredicted RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 NOBOXO60393 691 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 C8BP07358 591 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 FURINP09958 794 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 GRK3P35626 688 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 HPCAL1P37235 193 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 RPL3P39023 403 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 KIR3DL1P43629 444 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 AFF3P51826 1226 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 HNRNPKP61978 463 aaKnown RBP eCLIP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 RPS15AP62244 130 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 HHEXQ03014 270 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 BNIP2Q12982 314 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 C1orf61Q13536 156 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 RUNDC3AQ59EK9 446 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 PMS2CLQ68D20 193 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 FCRL6Q6DN72 434 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 FAAH2Q6GMR7 532 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 GPR180Q86V85 440 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 C11orf74Q86VG3 221 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 FAM20CQ8IXL6 584 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 TBC1D19Q8N5T2 526 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 TRPV3Q8NET8 790 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 OR7A2PQ8NGA2 310 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 NT5CQ8TCD5 201 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 C16orf78Q8WTQ4 265 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 DUS3LQ96G46 650 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 ITCHQ96J02 903 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 ANKRD27Q96NW4 1050 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 SLC6A16Q9GZN6 736 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 REXO4Q9GZR2 422 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 REEP4Q9H6H4 257 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 RMND5AQ9H871 391 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 DDX31Q9H8H2 851 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 IL1RL2Q9HB29 575 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 VAPAQ9P0L0 249 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 STX18Q9P2W9 335 aaKnown RBP5.27□□□□□ -1.57
EPHA4-202ENST00000409854 BTNL2Q9UIR0 455 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 PILRAQ9UKJ1 303 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 A0A0A6YYD5 115 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 OR6C74A6NCV1 312 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 LILRA5A6NI73 299 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 GABRR3A8MPY1 467 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 C2orf74A8MZ97 194 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 LMO7DNF2Z398 122 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 YY2O15391 372 aa5.27□□□□□ -1.57
EPHA4-202ENST00000409854 CAPN5O15484 640 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms