RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 FZD4Q9ULV1 537 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 WDR37Q9Y2I8 494 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.94□□□□□ -0.66
SNX13-202ENST00000409604 CKMT2P17540 419 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 PRPS1L1P21108 318 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 IMPA1P29218 277 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 MPIP34949 423 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 CA5AP35218 305 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 ADARP55265 1226 aaKnown RBP10.94□□□□□ -0.66
SNX13-202ENST00000409604 OR1D5P58170 312 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 WASHC2DQ5SRD0 308 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 PRMT9Q6P2P2 845 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 NEK5Q6P3R8 708 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 BHLHB9Q6PI77 547 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 TBC1D21Q8IYX1 336 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 AVL9Q8NBF6 648 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 TRPV3Q8NET8 790 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 MAL2Q969L2 176 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 LRRC58Q96CX6 371 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 ZBED6CLQ96FA7 236 aaPredicted RBP10.94□□□□□ -0.66
SNX13-202ENST00000409604 MAP3K3Q99759 626 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 CCDC134Q9H6E4 229 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 RASSF1Q9NS23 344 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 F10P00742 488 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 LAMP1P11279 417 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 TACR1P25103 407 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 RAPSNQ13702 412 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 CEACAM20Q6UY09 585 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 RNF130Q86XS8 419 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 ETFBKMTQ8IXQ9 262 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 EID3Q8N140 333 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 WDR60Q8WVS4 1066 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 DLG3Q92796 817 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 VWCEQ96DN2 955 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 UGT2B28Q9BY64 529 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 SPHK1Q9NYA1 384 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 KCMF1Q9P0J7 381 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 PNMA8CA0A1B0GUJ8 204 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 M0QX08 132 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 CLOCKO15516 846 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 PRKNO60260 465 aaPredicted RBP10.94□□□□□ -0.66
SNX13-202ENST00000409604 SERPINA1P01009 418 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 CCNYL3P0C7X3 344 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 CDH2P19022 906 aaPredicted RBP10.94□□□□□ -0.66
SNX13-202ENST00000409604 LTBRP36941 435 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 SLC19A1P41440 591 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 RGS8P57771 180 aaPredicted RBP10.94□□□□□ -0.66
SNX13-202ENST00000409604 TAP2Q03519 686 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 SLC34A1Q06495 639 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 LRRC74BQ6ZQY2 392 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 ABHD13Q7L211 337 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 ST13P4Q8IZP2 240 aaPredicted RBP10.94□□□□□ -0.66
SNX13-202ENST00000409604 OFCC1Q8IZS5 231 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 TP53INP1Q96A56 240 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 SORT1Q99523 831 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 MVB12BQ9H7P6 319 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 DNAAF2Q9NVR5 837 aaKnown RBP10.94□□□□□ -0.66
SNX13-202ENST00000409604 POMPQ9Y244 141 aa10.94□□□□□ -0.66
SNX13-202ENST00000409604 A0A1B0GTL3 188 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 CDC14CA4D256 554 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 A6NL46 340 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 CELA2BP08218 269 aaPredicted RBP10.93□□□□□ -0.66
SNX13-202ENST00000409604 CBLP22681 906 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 DRD3P35462 400 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 CAPZA2P47755 286 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.93□□□□□ -0.66
SNX13-202ENST00000409604 INTS11Q5TA45 600 aaKnown RBP10.93□□□□□ -0.66
SNX13-202ENST00000409604 SLC36A4Q6YBV0 504 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 GTPBP3Q969Y2 492 aaKnown RBP10.93□□□□□ -0.66
SNX13-202ENST00000409604 DACT3Q96B18 629 aaPredicted RBP10.93□□□□□ -0.66
SNX13-202ENST00000409604 SLC35G5Q96KT7 338 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 CGREF1Q99674 301 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 TPT1P8Q9HAU6 139 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 PISDQ9UG56 409 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 FAM220BPB1ANY3 271 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 PDLIM1O00151 329 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 AP3D1O14617 1153 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 MPC1LP0DKB6 136 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 RPL4P36578 427 aaKnown RBP10.93□□□□□ -0.66
SNX13-202ENST00000409604 HSD17B2P37059 387 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 CLCA4Q14CN2 919 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 SBSNQ6UWP8 590 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 TMEM107Q6UX40 140 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 OR9A4Q8NGU2 314 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 CIDECQ96AQ7 238 aaPredicted RBP10.93□□□□□ -0.66
SNX13-202ENST00000409604 DHRS4Q9BTZ2 278 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 HDAC8Q9BY41 377 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 YIPF3Q9GZM5 350 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 POPDC3Q9HBV1 291 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 AMBNQ9NP70 447 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 FAM221BA6H8Z2 402 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 PATE3B3GLJ2 98 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 ITGAXP20702 1163 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 RPL3P39023 403 aaKnown RBP10.93□□□□□ -0.66
SNX13-202ENST00000409604 CCT3P49368 545 aaKnown RBP10.93□□□□□ -0.66
SNX13-202ENST00000409604 BIKQ13323 160 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 SP140Q13342 867 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 TMEM154Q6P9G4 183 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 FIGNL1Q6PIW4 674 aa10.93□□□□□ -0.66
SNX13-202ENST00000409604 C11orf65Q8NCR3 313 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms