RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ATG9BQ674R7 924 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 KCTD8Q6ZWB6 473 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 ARHGAP12Q8IWW6 846 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 CHST14Q8NCH0 376 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 OR8J3Q8NGG0 315 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 BBS10Q8TAM1 723 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 TMEM125Q96AQ2 219 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 FAM210AQ96ND0 272 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 RC3H2Q9HBD1 1191 aaKnown RBP16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 RDH14Q9HBH5 336 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 HCFC1R1Q9NWW0 138 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 IKZF2Q9UKS7 526 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 G6PDP11413 515 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 MYCLP1P12525 358 aaPredicted RBP16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 S100GP29377 79 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 RHDQ02161 417 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 ACVR1CQ8NER5 493 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 C9orf43Q8TAL5 461 aaPredicted RBP16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 IPCEF1Q8WWN9 437 aaPredicted RBP16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 NODALQ96S42 347 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 HS3ST2Q9Y278 367 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 A0A0G2JN53 185 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 EI24O14681 340 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 H1F0P07305 194 aaKnown RBP16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 ACY1Q03154 408 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 MED22Q15528 200 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 ZNF550Q7Z398 422 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 OR4K17Q8NGC6 315 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 UBASH3BQ8TF42 649 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 L3HYPDHQ96EM0 354 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 SPRTNQ9H040 489 aaPredicted RBP16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 KATNBL1Q9H079 304 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 DNMT3BQ9UBC3 853 aaKnown RBP16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 NENFQ9UMX5 172 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 PDE10AQ9Y233 779 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 TESMINQ9Y4I5 508 aa16.2■□□□□ 0.18
PCDHA13-202ENST00000409494 CD68P34810 354 aaPredicted RBP16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 PCBP2Q15366 365 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 REEP3Q6NUK4 255 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 IKBIPQ70UQ0 350 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 SNX33Q8WV41 574 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 TRIM63Q969Q1 353 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 PNPLA2Q96AD5 504 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 COX4I2Q96KJ9 171 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 ZNF576Q9H609 170 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 POFUT2Q9Y2G5 429 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 RPL36Q9Y3U8 105 aaKnown RBP16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 ARHGEF33A8MVX0 844 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 TOR1BO14657 336 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 YPEL5P62699 121 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 KCNC4Q03721 635 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 SUSD1Q6UWL2 747 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 CEACAM20Q6UY09 585 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 ZUFSPQ96AP4 578 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 DTD2Q96FN9 168 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 APOOQ9BUR5 198 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 ZCWPW2A0A1B0GU75 182 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 HEXBP07686 556 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 TBPL1P62380 186 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 EGFLAMQ63HQ2 1017 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 ATCAYQ86WG3 371 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 PLD6Q8N2A8 252 aaKnown RBP16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 RARRES3Q9UL19 164 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 A0A096LPI6 279 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 OR6C74A6NCV1 312 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 VSTM5A8MXK1 200 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 ACADLP28330 430 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 IL12RB1P42701 662 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 GBX1Q14549 363 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 TAZQ16635 292 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 ANKRD54Q6NXT1 300 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 HDDC2Q7Z4H3 204 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 TMEM234Q8WY98 164 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 TIMM29Q9BSF4 260 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 RASSF1Q9NS23 344 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 TOR4AQ9NXH8 423 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 PRKAB1Q9Y478 270 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 IRAK3Q9Y616 596 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 LAMB1P07942 1786 aa16.19■□□□□ 0.18
PCDHA13-202ENST00000409494 H3BNC9 293 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 SLC6A4P31645 630 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 OR5L2Q8NGL0 311 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 DPH7Q9BTV6 452 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 DUSP23Q9BVJ7 150 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 IL26Q9NPH9 171 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 MARCH4Q9P2E8 410 aaPredicted RBP16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 MYH7BA7E2Y1 1941 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 BCORQ6W2J9 1755 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 ARSAP15289 507 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 ARSDP51689 593 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 SLC30A4O14863 429 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 B4GALT2O60909 372 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 CD2P06729 351 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 GSK3BP49841 420 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 ADAM17P78536 824 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 KIR2DS3Q14952 304 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 UNC50Q53HI1 259 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 ERI1Q8IV48 349 aaKnown RBP16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 ZSCAN1Q8NBB4 408 aa16.18■□□□□ 0.18
PCDHA13-202ENST00000409494 NT5C3BQ969T7 300 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms