RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SAMD4AQ9UPU9 718 aaKnown RBP19.82■□□□□ 0.76
USP39-203ENST00000409470 COL4A2P08572 1712 aa19.82■□□□□ 0.76
USP39-203ENST00000409470 SEMA3DO95025 777 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 PRSS23O95084 383 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 ZNF682O95780 498 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 NTRK1P04629 796 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 HOXC4P09017 264 aaPredicted RBP19.81■□□□□ 0.76
USP39-203ENST00000409470 TPP2P29144 1249 aaPredicted RBP19.81■□□□□ 0.76
USP39-203ENST00000409470 TPMTP51580 245 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 CLCN2P51788 898 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 PRDX1Q06830 199 aaKnown RBP19.81■□□□□ 0.76
USP39-203ENST00000409470 VAC14Q08AM6 782 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 TBPL2Q6SJ96 375 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 IKBIPQ70UQ0 350 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 GPR155Q7Z3F1 870 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 RD3Q7Z3Z2 195 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 EID3Q8N140 333 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 DENND6BQ8NEG7 585 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 ZFP90Q8TF47 636 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 CYGBQ8WWM9 190 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 CIDECQ96AQ7 238 aaPredicted RBP19.81■□□□□ 0.76
USP39-203ENST00000409470 MTERF3Q96E29 417 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 ZNF696Q9H7X3 374 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 MIEF1Q9NQG6 463 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 H0Y8X5 98 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 UPK1AO00322 258 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 PLOD2O00469 737 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 C6orf47O95873 294 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 TBX6O95947 436 aaPredicted RBP19.81■□□□□ 0.76
USP39-203ENST00000409470 HOXB6P17509 224 aaKnown RBP19.81■□□□□ 0.76
USP39-203ENST00000409470 IL1RNP18510 177 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 CSNK1G2P78368 415 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 NFATC4Q14934 902 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 TCEA2Q15560 299 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 TMEM31Q5JXX7 168 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 ANGPTL8Q6UXH0 198 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 PAGE2Q7Z2X7 111 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 PTOV1Q86YD1 416 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 OR10Q1Q8NGQ4 319 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 OR1E3Q8WZA6 343 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 SDCCAG3Q96C92 435 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 PDXPQ96GD0 296 aa19.81■□□□□ 0.76
USP39-203ENST00000409470 PRAMEF33A0A0G2JMD5 474 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 LRRC72A6NJI9 287 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 RTCAO00442 366 aaKnown RBP19.8■□□□□ 0.76
USP39-203ENST00000409470 GPR37L1O60883 481 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 SMIM18P0DKX4 95 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 MAPK12P53778 367 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 HBA1P69905 142 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 STK32CQ86UX6 486 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 TRIM69Q86WT6 500 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 ZDHHC13Q8IUH4 622 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 PLD3Q8IV08 490 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 OR2A1Q8NGT9 310 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 WDR92Q96MX6 357 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 SPATA9Q9BWV2 254 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 SCHIP1Q9P0W5 487 aaPredicted RBP19.8■□□□□ 0.76
USP39-203ENST00000409470 ICKQ9UPZ9 632 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 HEBP2Q9Y5Z4 205 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 MYOCOSA0A1B0GUC4 107 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 EME2A4GXA9 379 aaPredicted RBP19.8■□□□□ 0.76
USP39-203ENST00000409470 SERPIND1P05546 499 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 NELFEP18615 380 aaKnown RBP19.8■□□□□ 0.76
USP39-203ENST00000409470 HNRNPA2B1P22626 353 aaKnown RBP19.8■□□□□ 0.76
USP39-203ENST00000409470 HTR1BP28222 390 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 RGNQ15493 299 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 FBXO43Q4G163 708 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.8■□□□□ 0.76
USP39-203ENST00000409470 DHRSXQ8N5I4 330 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 TRIML2Q8N7C3 387 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 FAM47BQ8NA70 645 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 GOT1L1Q8NHS2 421 aaPredicted RBP19.8■□□□□ 0.76
USP39-203ENST00000409470 PNPLA3Q9NST1 481 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 COLEC10Q9Y6Z7 277 aa19.8■□□□□ 0.76
USP39-203ENST00000409470 G3V2T6 193 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 KDM1AO60341 852 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 ASGR2P07307 311 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 CD72P21854 359 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 ADRM1Q16186 407 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 SLC36A3Q495N2 470 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 FKBP9P1Q75LS8 142 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 ADHFE1Q8IWW8 467 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 MMP21Q8N119 569 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 PGBD3Q8N328 593 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 SYNPOQ8N3V7 929 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 FAM3CQ92520 227 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 TSACCQ96A04 125 aaPredicted RBP19.79■□□□□ 0.76
USP39-203ENST00000409470 BMFQ96LC9 184 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 QRFPRQ96P65 431 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 SLC35A5Q9BS91 424 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 FAM192AQ9GZU8 254 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 MRPS30Q9NP92 439 aaKnown RBP19.79■□□□□ 0.76
USP39-203ENST00000409470 TBC1D29Q9UFV1 150 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 RPS6KA6Q9UK32 745 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 MMP17Q9ULZ9 603 aa19.79■□□□□ 0.76
USP39-203ENST00000409470 IGKV1-8A0A0C4DH67 115 aa19.78■□□□□ 0.76
USP39-203ENST00000409470 CAPN5O15484 640 aaPredicted RBP19.78■□□□□ 0.76
USP39-203ENST00000409470 NDUFS4O43181 175 aa19.78■□□□□ 0.76
USP39-203ENST00000409470 LCMT2O60294 686 aaKnown RBP19.78■□□□□ 0.76
USP39-203ENST00000409470 PGM3O95394 542 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms