RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 UNC79Q9P2D8 2635 aa18.17■□□□□ 0.5
SMARCB1-204ENST00000407422 A8MUI8 341 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 EIF3HO15372 352 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 CHST10O43529 356 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 DEKP35659 375 aaKnown RBP18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 HNMTP50135 292 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 PLTPP55058 493 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 RAB8AP61006 207 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 ETF1P62495 437 aaKnown RBP18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 ZNF33BQ06732 778 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 RBBP5Q15291 538 aaKnown RBP18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 NSDHLQ15738 373 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 FCRLBQ6BAA4 426 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 PLAG1Q6DJT9 500 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 C3orf62Q6ZUJ4 267 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 MAGEB10Q96LZ2 347 aaPredicted RBP18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 OR1F2PQ96R84 312 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 AIF1LQ9BQI0 150 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 DERL2Q9GZP9 239 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 AICDAQ9GZX7 198 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 PLEKHB1Q9UF11 243 aaPredicted RBP18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 FAM159BA6NKW6 160 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 C4orf51C9J302 202 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 WDR47O94967 919 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 FHP07954 510 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 SLC6A12P48065 614 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 AGTR2P50052 363 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 AP2B1P63010 937 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 USP10Q14694 798 aaKnown RBP18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 TGFBIQ15582 683 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 SFT2D3Q587I9 215 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 FBXO48Q5FWF7 155 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 ABHD17BQ5VST6 288 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 RPUSD3Q6P087 351 aaKnown RBP18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 ABHD13Q7L211 337 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 PLPP5Q8NEB5 264 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 CREB3L4Q8TEY5 395 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 CDKL2Q92772 493 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 TBC1D20Q96BZ9 403 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 TAAR6Q96RI8 345 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 RBBP8Q99708 897 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 CPNE1Q99829 537 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 SLC6A16Q9GZN6 736 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 STMN3Q9NZ72 180 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 TXNDC16Q9P2K2 825 aa18.16■□□□□ 0.5
SMARCB1-204ENST00000407422 TRAV17A0A0B4J275 112 aa18.15■□□□□ 0.5
SMARCB1-204ENST00000407422 A1L4Q6 167 aa18.15■□□□□ 0.5
SMARCB1-204ENST00000407422 CCDC166P0CW27 439 aa18.15■□□□□ 0.5
SMARCB1-204ENST00000407422 IL10P22301 178 aa18.15■□□□□ 0.5
SMARCB1-204ENST00000407422 GMPRP36959 345 aa18.15■□□□□ 0.5
SMARCB1-204ENST00000407422 FAM180AQ6UWF9 173 aa18.15■□□□□ 0.5
SMARCB1-204ENST00000407422 FBXO25Q8TCJ0 367 aa18.15■□□□□ 0.5
SMARCB1-204ENST00000407422 GPR22Q99680 433 aa18.15■□□□□ 0.5
SMARCB1-204ENST00000407422 UTP11Q9Y3A2 253 aaKnown RBP18.15■□□□□ 0.5
SMARCB1-204ENST00000407422 TEX15Q9BXT5 2789 aa18.15■□□□□ 0.5
SMARCB1-204ENST00000407422 CELSR2Q9HCU4 2923 aa18.15■□□□□ 0.5
SMARCB1-204ENST00000407422 WIPF3A6NGB9 483 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 MAGEB17A8MXT2 336 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 TAPBPO15533 448 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 B4GALT2O60909 372 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 FAM155BO75949 473 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 LDLRP01130 860 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 SMIM10L1P0DMW3 83 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 GNAZP19086 355 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 GP5P40197 560 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 ST13P50502 369 aaKnown RBP18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 SRSF11Q05519 484 aaKnown RBP18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 OR4D1Q15615 310 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 PAPD4Q6PIY7 484 aaKnown RBP18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 ZDHHC24Q6UX98 284 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 SLCO4C1Q6ZQN7 724 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 CYS1Q717R9 158 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 CCDC25Q86WR0 208 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 KLHDC8AQ8IYD2 350 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 TRPV3Q8NET8 790 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 TSPAN17Q96FV3 270 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 SMIM10Q96HG1 83 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 SLX1AQ9BQ83 275 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 TMEM79Q9BSE2 394 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 RNF32Q9H0A6 362 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 SLC5A6Q9Y289 635 aa18.14■□□□□ 0.49
SMARCB1-204ENST00000407422 C1GALT1C1LP0DN25 315 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 EDN3P14138 238 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 CD1DP15813 335 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 STMN1P16949 149 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 TOR1AIP1Q5JTV8 583 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 H3F3CQ6NXT2 135 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 CTAGE3PQ8IX95 158 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 BCORP1Q8N888 145 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 ESAMQ96AP7 390 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 KCNK13Q9HB14 408 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 OLAHQ9NV23 265 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 TEKT2Q9UIF3 430 aa18.13■□□□□ 0.49
SMARCB1-204ENST00000407422 OR5H15A6NDH6 313 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 FAM227AF5H4B4 570 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 MAN1A2O60476 641 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 DDAH2O95865 285 aa18.12■□□□□ 0.49
SMARCB1-204ENST00000407422 SERPINA6P08185 405 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms