RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 ANKDD1BA6NHY2 528 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 GLOD5A6NK44 160 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 BTN3A3O00478 584 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 TMPRSS11DO60235 418 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 KCNK5O95279 499 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 FURINP09958 794 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 BMP2P12643 396 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 HSD3B1P14060 373 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 IL9P15248 144 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 FASP25445 335 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 HSD3B2P26439 372 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 PKLRP30613 574 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 RAB28P51157 221 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 POLE2P56282 527 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 SRSF11Q05519 484 aaKnown RBP13.45□□□□□ -0.26
PRAME-205ENST00000405655 CYP27C1Q4G0S4 372 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 LRRC23Q53EV4 343 aaPredicted RBP13.45□□□□□ -0.26
PRAME-205ENST00000405655 EOGTQ5NDL2 527 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 OTUD3Q5T2D3 398 aaPredicted RBP13.45□□□□□ -0.26
PRAME-205ENST00000405655 UGT2A3Q6UWM9 527 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 USP30Q70CQ3 517 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 VTCN1Q7Z7D3 282 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 TMEM179BQ7Z7N9 219 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 NAGSQ8N159 534 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 REPS1Q96D71 796 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 MAGEB10Q96LZ2 347 aaPredicted RBP13.45□□□□□ -0.26
PRAME-205ENST00000405655 HAUS8Q9BT25 410 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 MS4A8Q9BY19 250 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 TPT1P8Q9HAU6 139 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 PRDM6Q9NQX0 595 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 TEX10Q9NXF1 929 aaPredicted RBP13.45□□□□□ -0.26
PRAME-205ENST00000405655 TAAR2Q9P1P5 351 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 THEGQ9P2T0 379 aa13.45□□□□□ -0.26
PRAME-205ENST00000405655 UPK1AO00322 258 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 EI24O14681 340 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 HNRNPRO43390 633 aaKnown RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 NME6O75414 186 aaPredicted RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 CHRNB1P11230 501 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 HNRNPA2B1P22626 353 aaKnown RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 MAOBP27338 520 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 BSGP35613 385 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 SLC19A1P41440 591 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 RPS26P62854 115 aaKnown RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 CCNYL2Q5T2Q4 361 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 RNF220Q5VTB9 566 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 KHDRBS2Q5VWX1 349 aaKnown RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 FAM71E1Q6IPT2 247 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 PROSER1Q86XN7 944 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 ANKFN1Q8N957 763 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 SCARF2Q96GP6 870 aaPredicted RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 WDR92Q96MX6 357 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 TEFMQ96QE5 360 aaKnown RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 C17orf62Q9BQA9 187 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 DPH7Q9BTV6 452 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 EFHD1Q9BUP0 239 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 C1QTNF7Q9BXJ2 289 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 TRIM4Q9C037 500 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 SLC6A16Q9GZN6 736 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 REEP4Q9H6H4 257 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 MAGEL2Q9UJ55 1249 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 U3KQV3 271 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 C1orf226A1L170 272 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 ISM1B1AKI9 464 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 SMNDC1O75940 238 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRAME-205ENST00000405655 ZNF682O95780 498 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 GPIP06744 558 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 ALPPL2P10696 532 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 PRKACGP22612 351 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 TEAD1P28347 426 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 SRP54P61011 504 aaKnown RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 REEP5Q00765 189 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 MYBPC1Q00872 1141 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 PRDX1Q06830 199 aaKnown RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 FOXD4Q12950 439 aaPredicted RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 ZNF750Q32MQ0 723 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 ZIK1Q3SY52 487 aaPredicted RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 GALNT18Q6P9A2 607 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 ZNF793Q6ZN11 406 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 ZZZ3Q8IYH5 903 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 KRT78Q8N1N4 520 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 ABHD11Q8NFV4 315 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 COQ8BQ96D53 544 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 BARD1Q99728 777 aaKnown RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 AIF1LQ9BQI0 150 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 PHF7Q9BWX1 381 aaPredicted RBP13.44□□□□□ -0.26
PRAME-205ENST00000405655 LMAN1LQ9HAT1 526 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 WASH6PQ9NQA3 447 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 TRPV5Q9NQA5 729 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 VNN3Q9NY84 501 aa13.44□□□□□ -0.26
PRAME-205ENST00000405655 PRICKLE3O43900 615 aaPredicted RBP13.43□□□□□ -0.26
PRAME-205ENST00000405655 SH3BP5O60239 455 aa13.43□□□□□ -0.26
PRAME-205ENST00000405655 RPN2P04844 631 aa13.43□□□□□ -0.26
PRAME-205ENST00000405655 ETFAP13804 333 aa13.43□□□□□ -0.26
PRAME-205ENST00000405655 TNFRSF1BP20333 461 aa13.43□□□□□ -0.26
PRAME-205ENST00000405655 PTX3P26022 381 aaPredicted RBP13.43□□□□□ -0.26
PRAME-205ENST00000405655 PIK3CBP42338 1070 aa13.43□□□□□ -0.26
PRAME-205ENST00000405655 CRYBA2P53672 197 aa13.43□□□□□ -0.26
PRAME-205ENST00000405655 PPP1CAP62136 330 aa13.43□□□□□ -0.26
PRAME-205ENST00000405655 SMAD4Q13485 552 aaKnown RBP13.43□□□□□ -0.26
PRAME-205ENST00000405655 SPIDRQ14159 915 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms