RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 DOK1Q99704 481 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 CREBZFQ9NS37 354 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 GFRA2O00451 464 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 NME6O75414 186 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 NRIP1P48552 1158 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 METAP1P53582 386 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 SLC35A2P78381 396 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 TSTQ16762 297 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 GCNT6Q5T4J0 391 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 ENTHD1Q8IYW4 607 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 TCAIMQ8N3R3 496 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 RASGEF1AQ8N9B8 481 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 Q8N9G6 341 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 FIBINQ8TAL6 211 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 CHPT1Q8WUD6 406 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 FKBP10Q96AY3 582 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 CAPNS2Q96L46 248 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 TBCCD1Q9NVR7 557 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 VWA8A3KMH1 1905 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 TRBC2A0A5B9 178 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 SNPHO15079 494 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 GADD45GO95257 159 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 IGFBP1P08833 259 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 CYP2A6P11509 494 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 GRK3P35626 688 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 ELP6Q0PNE2 266 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 IFI44LQ53G44 452 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 DEPDC1Q5TB30 811 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 ERICH5Q6P6B1 374 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 SPATC1Q76KD6 591 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 FAM20CQ8IXL6 584 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 CADM3Q8N126 398 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 FAM83FQ8NEG4 500 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 KLK6Q92876 244 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 MACROD1Q9BQ69 325 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 NEURL2Q9BR09 285 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 ITPAQ9BY32 194 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 TOR4AQ9NXH8 423 aa12.18□□□□□ -0.46
PPP4R1-202ENST00000400555 LATO43561 262 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 ERAL1O75616 437 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 ABLIM3O94929 683 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 MFN2O95140 757 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 MANFP55145 182 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 TBPL1P62380 186 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 CDK6Q00534 326 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 KRT33BQ14525 404 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 GATAD2AQ86YP4 633 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 AMER2Q8N7J2 671 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 S100ZQ8WXG8 99 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 OVCA2Q8WZ82 227 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 MYDGFQ969H8 173 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 DSN1Q9H410 356 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 MAGIXQ9H6Y5 334 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 RDH14Q9HBH5 336 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 ERVK13-1Q9NX77 482 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 TMCC3Q9ULS5 477 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 PTPRDP23468 1912 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 DICER1Q9UPY3 1922 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 A0A1W2PRB8 838 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 FADS2P1A8MWK0 482 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 SCAMP2O15127 329 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 SGTAO43765 313 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 MMP20O60882 483 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 ZNF821O75541 412 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 BCHEP06276 602 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 CBSLP0DN79 551 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 CBSP35520 551 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 INAVAQ3KP66 663 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 ZNF385BQ569K4 471 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 CAPN13Q6MZZ7 669 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 COMMD6Q7Z4G1 85 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 TSPYL5Q86VY4 417 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 SLC7A5P1Q8MH63 180 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 PJA1Q8NG27 643 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 GANCQ8TET4 914 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 FAM129BQ96TA1 746 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 DOHHQ9BU89 302 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 HCFC2Q9Y5Z7 792 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 GRXCR2A6NFK2 248 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 WASH3PC4AMC7 463 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 SLC16A6O15403 523 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 IMPDH2P12268 514 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 RYKP34925 604 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 CD97P48960 835 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 AP1S2P56377 157 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 GABARAPL2P60520 117 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 SLC5A12Q1EHB4 618 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 ZNF404Q494X3 552 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 SPANXN2Q5MJ10 180 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 RSBN1Q5VWQ0 802 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 KDM4DQ6B0I6 523 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 ZNF783Q6ZMS7 281 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 C7orf57Q8NEG2 295 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 ZNF675Q8TD23 568 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 OR4K3Q96R72 315 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 CCM2Q9BSQ5 444 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 IL21Q9HBE4 155 aa12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 FAM120CQ9NX05 1096 aaKnown RBP12.17□□□□□ -0.46
PPP4R1-202ENST00000400555 K7ESM1 405 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms