RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 EPYCQ99645 322 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TIMM29Q9BSF4 260 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 REEP1Q9H902 201 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CXorf21Q9HAI6 301 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ADAM29Q9UKF5 820 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 EXO1Q9UQ84 846 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PCDHGB3Q9Y5G1 929 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PDE4DIPQ5VU43 2346 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 M0QX08 132 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PLK4O00444 970 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 JRKO75564 520 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PCDH8O95206 1070 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SLC35G4P0C7Q5 338 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ETS2P15036 469 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 IGFBP5P24593 272 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SLC5A2P31639 672 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ARFIP1P53367 373 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 RPS21P63220 83 aaKnown RBP16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SELENOWP63302 87 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CSNK2BP67870 215 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TSTA3Q13630 321 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 EGFLAMQ63HQ2 1017 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 KDM4DQ6B0I6 523 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 KIAA1161Q6NSJ0 714 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PLA2G15Q8NCC3 412 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TTLQ8NG68 377 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 AMBRA1Q9C0C7 1298 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 WDR26Q9H7D7 661 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TMEFF2Q9UIK5 374 aaPredicted RBP16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TMEM98Q9Y2Y6 226 aa16.99■□□□□ 0.31
HLA-DQB1-204ENST00000399084 C2orf16Q68DN1 1984 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 KDM1AO60341 852 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TNFRSF21O75509 655 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 B3GALT4O96024 378 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ITGA2P17301 1181 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 DCKP27707 260 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TAS2R38P59533 333 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ISL1P61371 349 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TRA2BP62995 288 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ATAT1Q5SQI0 421 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 KHDRBS2Q5VWX1 349 aaKnown RBP16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ZNF776Q68DI1 518 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 KCTD8Q6ZWB6 473 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 OR5AR1Q8NGP9 310 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 FAM131CQ96AQ9 280 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 HSH2DQ96JZ2 352 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 C1QTNF2Q9BXJ5 285 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 OR51B5Q9H339 312 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 POLR1BQ9H9Y6 1135 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SPASTQ9UBP0 616 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CIDEBQ9UHD4 219 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 HCN2Q9UL51 889 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PCDHGA8Q9Y5G5 932 aa16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 MAGED1Q9Y5V3 778 aaPredicted RBP16.98■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TNRC18O15417 2968 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 A8MVJ9 347 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 GRXCR1A8MXD5 290 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 MAGEA8P43361 318 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 IST1P53990 364 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TMBIM6P55061 237 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 HBA1P69905 142 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 HEPACAMQ14CZ8 416 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 GCNT6Q5T4J0 391 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ADNP2Q6IQ32 1131 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TMIGD2Q96BF3 282 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 C7orf34Q96L11 122 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 APOL4Q9BPW4 351 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SLC35A5Q9BS91 424 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 UTS2RQ9UKP6 389 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SH2B3Q9UQQ2 575 aa16.97■□□□□ 0.31
HLA-DQB1-204ENST00000399084 A0A1W2PRB8 838 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ADAMDEC1O15204 470 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 MID1O15344 667 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CAPN5O15484 640 aaPredicted RBP16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 C9P02748 559 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PCCBP05166 539 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 KLK1P06870 262 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 UQCRC2P22695 453 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 EEF1B2P24534 225 aaKnown RBP16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PRIM2P49643 509 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 MVDP53602 400 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TAS2R50P59544 299 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 REEP5Q00765 189 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SGCGQ13326 291 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ANKRD26P1Q6NSI1 321 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ANKRD54Q6NXT1 300 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TMEM179BQ7Z7N9 219 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TSPYL5Q86VY4 417 aaPredicted RBP16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 NAGSQ8N159 534 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 HDDC3Q8N4P3 179 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 CHDHQ8NE62 594 aaPredicted RBP16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ASB12Q8WXK4 309 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 MIEF1Q9NQG6 463 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 C1GALT1Q9NS00 363 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SLC23A2Q9UGH3 650 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 SCML1Q9UN30 329 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 ZNF451Q9Y4E5 1061 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 PCDHGB1Q9Y5G3 927 aa16.96■□□□□ 0.31
HLA-DQB1-204ENST00000399084 TRIM64BA6NI03 449 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms