RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 MTO1Q9Y2Z2 717 aaKnown RBP12.66□□□□□ -0.38
VCX3A-202ENST00000398729 ITPR3Q14573 2671 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 ANKUB1A6NFN9 424 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 URADA6NGE7 173 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 ZNF860A6NHJ4 632 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 FAM159BA6NKW6 160 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 GALR3O60755 368 aaPredicted RBP12.65□□□□□ -0.38
VCX3A-202ENST00000398729 WDR47O94967 919 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 CELA2AP08217 269 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 ITGAMP11215 1152 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 ALOX12P18054 663 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 TNFRSF8P28908 595 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 SOX11P35716 441 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 GP5P40197 560 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 PLTPP55058 493 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 REEP5Q00765 189 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 DEFB134Q4QY38 66 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 CCDC25Q86WR0 208 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 CTAGE3PQ8IX95 158 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 AFAP1L2Q8N4X5 818 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 TRPV3Q8NET8 790 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 RHBDF1Q96CC6 855 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 PEX11GQ96HA9 241 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 RBBP8Q99708 897 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 BARD1Q99728 777 aaKnown RBP12.65□□□□□ -0.38
VCX3A-202ENST00000398729 CAB39LQ9H9S4 337 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 NTNG1Q9Y2I2 539 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 HIVEP1P15822 2718 aa12.65□□□□□ -0.38
VCX3A-202ENST00000398729 IGHV3-20A0A0C4DH32 117 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 PHGDHO43175 533 aaKnown RBP12.64□□□□□ -0.39
VCX3A-202ENST00000398729 H2AFYO75367 372 aaKnown RBP12.64□□□□□ -0.39
VCX3A-202ENST00000398729 CDC123O75794 336 aaPredicted RBP12.64□□□□□ -0.39
VCX3A-202ENST00000398729 SEC24DO94855 1032 aaPredicted RBP12.64□□□□□ -0.39
VCX3A-202ENST00000398729 WISP3O95389 354 aaPredicted RBP12.64□□□□□ -0.39
VCX3A-202ENST00000398729 ZNF888P0CJ79 500 aaPredicted RBP12.64□□□□□ -0.39
VCX3A-202ENST00000398729 CCDC166P0CW27 439 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 STMN1P16949 149 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 GNAZP19086 355 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 CKAP4Q07065 602 aaKnown RBP12.64□□□□□ -0.39
VCX3A-202ENST00000398729 RBBP5Q15291 538 aaKnown RBP12.64□□□□□ -0.39
VCX3A-202ENST00000398729 TGFBIQ15582 683 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 BTBD16Q32M84 506 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 ABHD17BQ5VST6 288 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 PLAG1Q6DJT9 500 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 LANCL3Q6ZV70 420 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 ZNF572Q7Z3I7 529 aaPredicted RBP12.64□□□□□ -0.39
VCX3A-202ENST00000398729 ANKRD37Q7Z713 158 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 SHISA5Q8N114 240 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 TCAIMQ8N3R3 496 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 ANKRD53Q8N9V6 530 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 CATSPER1Q8NEC5 780 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 OR5T3Q8NGG3 340 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 OR1N1Q8NGS0 311 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 FBXO25Q8TCJ0 367 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 HAS2Q92819 552 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 TBC1D20Q96BZ9 403 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 GPR22Q99680 433 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 RBCK1Q9BYM8 510 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 UNKQ9C0B0 810 aaKnown RBP12.64□□□□□ -0.39
VCX3A-202ENST00000398729 TEKT2Q9UIF3 430 aa12.64□□□□□ -0.39
VCX3A-202ENST00000398729 MTORP42345 2549 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 TRAV17A0A0B4J275 112 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 OR2W5A6NFC9 320 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 NCF1BA6NI72 391 aaPredicted RBP12.63□□□□□ -0.39
VCX3A-202ENST00000398729 NCF1CA8MVU1 366 aaPredicted RBP12.63□□□□□ -0.39
VCX3A-202ENST00000398729 CHST10O43529 356 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 FHP07954 510 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 SERPINA6P08185 405 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 C1GALT1C1LP0DN25 315 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 PRF1P14222 555 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 NCF1P14598 390 aaPredicted RBP12.63□□□□□ -0.39
VCX3A-202ENST00000398729 JAK1P23458 1154 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 STX2P32856 288 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 SPRP35270 261 aaPredicted RBP12.63□□□□□ -0.39
VCX3A-202ENST00000398729 GDF5P43026 501 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 MAGEA4P43358 317 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 SLC6A12P48065 614 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 GPX6P59796 221 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 RAB10P61026 200 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 ATP6V0D1P61421 351 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 OLR1P78380 273 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 RHAGQ02094 409 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 ACTN3Q08043 901 aaPredicted RBP12.63□□□□□ -0.39
VCX3A-202ENST00000398729 ABRAXAS2Q15018 415 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 NSDHLQ15738 373 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 EXT1Q16394 746 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 KBTBD12Q3ZCT8 623 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 CDKL4Q5MAI5 379 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 GRTP1Q5TC63 336 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 RPUSD3Q6P087 351 aaKnown RBP12.63□□□□□ -0.39
VCX3A-202ENST00000398729 FAM180AQ6UWF9 173 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 GPSM1Q86YR5 675 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 KLHDC8AQ8IYD2 350 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 SPATA6LQ8N4H0 392 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 ST6GALNAC3Q8NDV1 305 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 PLPP5Q8NEB5 264 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 TTLQ8NG68 377 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 GRHL3Q8TE85 626 aa12.63□□□□□ -0.39
VCX3A-202ENST00000398729 UTP15Q8TED0 518 aaKnown RBP12.63□□□□□ -0.39
VCX3A-202ENST00000398729 LPAR4Q99677 370 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms