RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 FRA10AC1Q70Z53 315 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 ADAMTSL2Q86TH1 951 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 ISCA2Q86U28 154 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 LAPTM4BQ86VI4 370 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 NUDCD3Q8IVD9 361 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 PRSS58Q8IYP2 241 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 OR2A1Q8NGT9 310 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 PPP1R14CQ8TAE6 165 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 GRHL3Q8TE85 626 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 DLG3Q92796 817 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 FKBP10Q96AY3 582 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 C8orf44Q96CB5 159 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 CCDC126Q96EE4 140 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 C5orf34Q96MH7 638 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 FOPNLQ96NB1 174 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 PHF12Q96QT6 1004 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 MIPEPQ99797 713 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 WDR77Q9BQA1 342 aaPredicted RBP9.83□□□□□ -0.84
NEDD8-202ENST00000396828 TRIM54Q9BYV2 358 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 UNKQ9C0B0 810 aaKnown RBP9.83□□□□□ -0.84
NEDD8-202ENST00000396828 C12orf65Q9H3J6 166 aaKnown RBP9.83□□□□□ -0.84
NEDD8-202ENST00000396828 ALG9Q9H6U8 611 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 WDR54Q9H977 334 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 COPG2Q9UBF2 871 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 ADAM21Q9UKJ8 722 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 EMCNQ9ULC0 261 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 TMCO1Q9UM00 188 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 ZGRF1Q86YA3 2104 aa9.83□□□□□ -0.84
NEDD8-202ENST00000396828 TEP1Q99973 2627 aaKnown RBP9.82□□□□□ -0.84
NEDD8-202ENST00000396828 HYKKA2RU49 373 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 WDR91A4D1P6 747 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 NPEPPSL1A6NEC2 478 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 SLC16A5O15375 505 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 LRRTM2O43300 516 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 KERAO60938 352 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 IPO13O94829 963 aaKnown RBP9.82□□□□□ -0.84
NEDD8-202ENST00000396828 IGHEP01854 428 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 EIF2S1P05198 315 aaKnown RBP9.82□□□□□ -0.84
NEDD8-202ENST00000396828 BPGMP07738 259 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 CELA2AP08217 269 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 ENO2P09104 434 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-202ENST00000396828 HIST1H2AGP0C0S8 130 aaPredicted RBP9.82□□□□□ -0.84
NEDD8-202ENST00000396828 DHRS4L1P0CG22 281 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 HIST1H2ADP20671 130 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 EFNA3P52797 238 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 PRKAA2P54646 552 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 WDR4P57081 412 aaKnown RBP9.82□□□□□ -0.84
NEDD8-202ENST00000396828 KLC1Q07866 573 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 SP140Q13342 867 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 GBX1Q14549 363 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 GRM7Q14831 915 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 TSNQ15631 228 aaKnown RBP9.82□□□□□ -0.84
NEDD8-202ENST00000396828 ZYG11AQ6WRX3 759 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 PIWIL4Q7Z3Z4 852 aaKnown RBP9.82□□□□□ -0.84
NEDD8-202ENST00000396828 GPSM1Q86YR5 675 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 SLC22A9Q8IVM8 553 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 ST6GALNAC3Q8NDV1 305 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 OR2L3Q8NG85 312 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 DNAJB14Q8TBM8 379 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 PPP4R1Q8TF05 950 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 PSMF1Q92530 271 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 SLC22A18Q96BI1 424 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 THOC3Q96J01 351 aaKnown RBP9.82□□□□□ -0.84
NEDD8-202ENST00000396828 HIST1H2AHQ96KK5 128 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 CNDP1Q96KN2 507 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 C10orf90Q96M02 699 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 MAGEB18Q96M61 343 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 HIST1H2AJQ99878 128 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 H2AFJQ9BTM1 129 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 ACAT2Q9BWD1 397 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 ENAMQ9NRM1 1142 aa9.82□□□□□ -0.84
NEDD8-202ENST00000396828 ADGRG4Q8IZF6 3080 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 IGKV1-8A0A0C4DH67 115 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 SUPT3HB4E1H0 165 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 G3V2L1 256 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 CDC7O00311 574 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 KDM1AO60341 852 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 H2AFYO75367 372 aaKnown RBP9.81□□□□□ -0.84
NEDD8-202ENST00000396828 SUPT3HO75486 399 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 RPN2P04844 631 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 ZGLP1P0C6A0 271 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 GFAPP14136 432 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 ATP5F1P24539 256 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-202ENST00000396828 ALDH3A1P30838 453 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 ZNF169Q14929 603 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-202ENST00000396828 PCLAFQ15004 111 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 OR4D1Q15615 310 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 RBBP7Q16576 425 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 PDK4Q16654 411 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 ZC3H12BQ5HYM0 836 aaKnown RBP9.81□□□□□ -0.84
NEDD8-202ENST00000396828 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.81□□□□□ -0.84
NEDD8-202ENST00000396828 TCTE1Q5JU00 501 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 AGAP7PQ5VUJ5 663 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 ATG9BQ674R7 924 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 ATG16L1Q676U5 607 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 TTC23LQ6PF05 361 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 SUSD1Q6UWL2 747 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 CYHR1Q6ZMK1 362 aa9.81□□□□□ -0.84
NEDD8-202ENST00000396828 UBE2R2Q712K3 238 aaPredicted RBP9.81□□□□□ -0.84
NEDD8-202ENST00000396828 TMEM151AQ8N4L1 468 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms