RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 NOL11Q9H8H0 719 aaKnown RBP18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 PCTPQ9UKL6 214 aa18.01■□□□□ 0.47
PDLIM7-204ENST00000393546 DLX3O60479 287 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 CLDN9O95484 217 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 IGHEP01854 428 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 UMODP07911 640 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 SMIM10L1P0DMW3 83 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 PCNAP12004 261 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 SERPINB1P30740 379 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 ARL1P40616 181 aaPredicted RBP18■□□□□ 0.47
PDLIM7-204ENST00000393546 FOXL2P58012 376 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 RAB8AP61006 207 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 MAT1AQ00266 395 aaKnown RBP18■□□□□ 0.47
PDLIM7-204ENST00000393546 SYT16Q17RD7 645 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 DEFB134Q4QY38 66 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 TRABD2AQ86V40 505 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 PDSS2Q86YH6 399 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 PRSS58Q8IYP2 241 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 C4orf33Q8N1A6 199 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 OR7G3Q8NG95 312 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 OR51Q1Q8NH59 317 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 PPP4R1Q8TF05 950 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 NACC2Q96BF6 587 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 SMIM10Q96HG1 83 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 C1QTNF3Q9BXJ4 246 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 TGIF2Q9GZN2 237 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 C14orf105Q9NVL8 296 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 ADGRE2Q9UHX3 823 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 PCDHGA11Q9Y5H2 935 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 KCNMB2Q9Y691 235 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 NBEAQ8NFP9 2946 aa18■□□□□ 0.47
PDLIM7-204ENST00000393546 LRIT2A6NDA9 550 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 PEX12O00623 359 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 OR7A17O14581 309 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 FFAR3O14843 346 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 GPR42O15529 346 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 GALR3O60755 368 aaPredicted RBP17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 RDH16O75452 317 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 RPS17P08708 135 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 IMPDH1P20839 514 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 HERVK_113P63132 956 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 KLC1Q07866 573 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 LINC00303Q3SY05 128 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 KRT71Q3SY84 523 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 VN1R5Q7Z5H4 357 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 L3MBTL4Q8NA19 623 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 CCDC63Q8NA47 563 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 LSM14AQ8ND56 463 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 ZNF483Q8TF39 744 aaPredicted RBP17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 GAL3ST3Q96A11 431 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 REPS1Q96D71 796 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 CCDC126Q96EE4 140 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 FAR2Q96K12 515 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 NSUN5Q96P11 429 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 CRB3Q9BUF7 120 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 NTMT1Q9BV86 223 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 ERVK-6Q9BXR3 956 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 CLK4Q9HAZ1 481 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 SEMA3GQ9NS98 782 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 HCN3Q9P1Z3 774 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 EMCNQ9ULC0 261 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 RNF11Q9Y3C5 154 aa17.99■□□□□ 0.47
PDLIM7-204ENST00000393546 CCDC151A5D8V7 595 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 PLIN3O60664 434 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 SUPT7LO94864 414 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 PROCP04070 461 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 MYL2P10916 166 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 IL10P22301 178 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 MMP11P24347 488 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 PRKAA2P54646 552 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 EMP2P54851 167 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 TGM3Q08188 693 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 RBBP7Q16576 425 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 CPSF6Q16630 551 aaKnown RBP eCLIP17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 ZNF678Q5SXM1 525 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 ADNP2Q6IQ32 1131 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 MILR1Q7Z6M3 343 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 TMEM151BQ8IW70 566 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 SRRM1Q8IYB3 904 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 IQCKQ8N0W5 287 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 ZNF473Q8WTR7 871 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 MS4A6EQ96DS6 147 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 VPS50Q96JG6 964 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 REXO4Q9GZR2 422 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 IQCGQ9H095 443 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 ZBTB26Q9HCK0 441 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 SEMA4BQ9NPR2 832 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 C3orf18Q9UK00 162 aa17.98■□□□□ 0.47
PDLIM7-204ENST00000393546 ZFYVE26Q68DK2 2539 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 FAM208BQ5VWN6 2430 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 A0A088AWK7 358 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 ZNF860A6NHJ4 632 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 ARGFXA6NJG6 315 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 H0YIV9 168 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 ATXN7O15265 892 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 ERI3O43414 337 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 BMP10O95393 424 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 B3GALT4O96024 378 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 HEXBP07686 556 aa17.97■□□□□ 0.47
PDLIM7-204ENST00000393546 ZNF10P21506 573 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms