RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 ATG2BQ96BY7 2078 aa17.69■□□□□ 0.42
TRAF3-203ENST00000392745 PABPN1LA6NDY0 278 aaKnown RBP17.68■□□□□ 0.42
TRAF3-203ENST00000392745 A6NL46 340 aa17.68■□□□□ 0.42
TRAF3-203ENST00000392745 SEC22BO75396 215 aa17.68■□□□□ 0.42
TRAF3-203ENST00000392745 C1QCP02747 245 aa17.68■□□□□ 0.42
TRAF3-203ENST00000392745 EIF2S1P05198 315 aaKnown RBP17.68■□□□□ 0.42
TRAF3-203ENST00000392745 MAGEA2P43356 314 aa17.68■□□□□ 0.42
TRAF3-203ENST00000392745 CLK1P49759 484 aaKnown RBP17.68■□□□□ 0.42
TRAF3-203ENST00000392745 ELAVL3Q14576 367 aaKnown RBP17.68■□□□□ 0.42
TRAF3-203ENST00000392745 ZXDCQ2QGD7 858 aaPredicted RBP17.68■□□□□ 0.42
TRAF3-203ENST00000392745 ZNF404Q494X3 552 aa17.68■□□□□ 0.42
TRAF3-203ENST00000392745 ATG9BQ674R7 924 aa17.68■□□□□ 0.42
TRAF3-203ENST00000392745 GALNT10Q86SR1 603 aa17.68■□□□□ 0.42
TRAF3-203ENST00000392745 FGF14Q92915 247 aa17.68■□□□□ 0.42
TRAF3-203ENST00000392745 CPPED1Q9BRF8 314 aaPredicted RBP17.68■□□□□ 0.42
TRAF3-203ENST00000392745 INPP5KQ9BT40 448 aa17.68■□□□□ 0.42
TRAF3-203ENST00000392745 CD244Q9BZW8 370 aa17.68■□□□□ 0.42
TRAF3-203ENST00000392745 ITM2CQ9NQX7 267 aa17.68■□□□□ 0.42
TRAF3-203ENST00000392745 ISPDA4D126 451 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 TMEM202A6NGA9 273 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 CLDN24A6NM45 220 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 WNT9AO14904 365 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 RGS14O43566 566 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 RPIAP49247 311 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 FADDQ13158 208 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 ZNF284Q2VY69 593 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 THOC7Q6I9Y2 204 aaKnown RBP17.67■□□□□ 0.42
TRAF3-203ENST00000392745 DESI1Q6ICB0 168 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 PARM1Q6UWI2 310 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 ZNF551Q7Z340 670 aaPredicted RBP17.67■□□□□ 0.42
TRAF3-203ENST00000392745 NANOGNBQ7Z5D8 188 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 COQ10AQ96MF6 247 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 GABARAPL1Q9H0R8 117 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 RAD18Q9NS91 495 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 WWOXQ9NZC7 414 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 NDRG4Q9ULP0 352 aaKnown RBP17.67■□□□□ 0.42
TRAF3-203ENST00000392745 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.67■□□□□ 0.42
TRAF3-203ENST00000392745 TESMINQ9Y4I5 508 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 AGAP5A6NIR3 686 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 METTL15A6NJ78 407 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 hCG_2039718K7EN88 272 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 ASNA1O43681 348 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 CTSCP53634 463 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 MVKQ03426 396 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 SLC14A1Q13336 389 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 OR2T5Q6IEZ7 315 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 MMAAQ8IVH4 418 aaKnown RBP17.67■□□□□ 0.42
TRAF3-203ENST00000392745 CPA6Q8N4T0 437 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 RASGEF1AQ8N9B8 481 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 GLB1L3Q8NCI6 653 aaPredicted RBP17.67■□□□□ 0.42
TRAF3-203ENST00000392745 OR2T29Q8NH02 315 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 ASB11Q8WXH4 323 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 GLYATL1Q969I3 302 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 GDF15Q99988 308 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 APOL4Q9BPW4 351 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 PDP1Q9P0J1 537 aaPredicted RBP17.67■□□□□ 0.42
TRAF3-203ENST00000392745 HSPE1-MOB4S4R3N1 261 aa17.67■□□□□ 0.42
TRAF3-203ENST00000392745 WBP4O75554 376 aaKnown RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 GNPDA1P46926 289 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 DLX2Q07687 328 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 CACHD1Q5VU97 1274 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 UBE2R2Q712K3 238 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 RGL4Q8IZJ4 473 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 SKA2Q8WVK7 121 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 ELMO1Q92556 727 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 MTFMTQ96DP5 389 aaKnown RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 ZNF486Q96H40 463 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 VPS35Q96QK1 796 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 TP63Q9H3D4 680 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 SERHLQ9NQF3 203 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 CLEC1BQ9P126 229 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 CAB39Q9Y376 341 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 NUP214P35658 2090 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 KRT87PA6NCN2 255 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 EIF3FO00303 357 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 PCDHGA12O60330 932 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 KAT7O95251 611 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 DBTP11182 482 aaKnown RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 ADRB3P13945 408 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 IL1RNP18510 177 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 CDKN2CP42773 168 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 ZNF181Q2M3W8 571 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 ATAT1Q5SQI0 421 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 TIFAQ96CG3 184 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 DTD2Q96FN9 168 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 SIGLEC11Q96RL6 698 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 SLC12A9Q9BXP2 914 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 MMP27Q9H306 513 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 LRTM1Q9HBL6 345 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 PRSS16Q9NQE7 514 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 THAP10Q9P2Z0 257 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 FAM8A1Q9UBU6 413 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 ZNF490Q9ULM2 529 aaPredicted RBP17.66■□□□□ 0.42
TRAF3-203ENST00000392745 TMEM98Q9Y2Y6 226 aa17.66■□□□□ 0.42
TRAF3-203ENST00000392745 K7ESM1 405 aa17.65■□□□□ 0.42
TRAF3-203ENST00000392745 AIREO43918 545 aa17.65■□□□□ 0.42
TRAF3-203ENST00000392745 SOD1P00441 154 aa17.65■□□□□ 0.42
TRAF3-203ENST00000392745 CASP3P42574 277 aa17.65■□□□□ 0.42
TRAF3-203ENST00000392745 NEK2P51955 445 aa17.65■□□□□ 0.42
TRAF3-203ENST00000392745 TMEM115Q12893 351 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms