RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 A0A1W2PP55 124 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 A0A1W2PQF6 199 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 TMEM233B4DJY2 109 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 IL7P13232 177 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 CAPGP40121 348 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 SCRN3Q0VDG4 424 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 SMAD4Q13485 552 aaKnown RBP18.29■□□□□ 0.52
CCDC50-202ENST00000392456 KRR1Q13601 381 aaKnown RBP18.29■□□□□ 0.52
CCDC50-202ENST00000392456 HABP4Q5JVS0 413 aaKnown RBP18.29■□□□□ 0.52
CCDC50-202ENST00000392456 AGBL4Q5VU57 503 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 IRAK1BP1Q5VVH5 260 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 RP9Q8TA86 221 aaKnown RBP18.29■□□□□ 0.52
CCDC50-202ENST00000392456 MAPK15Q8TD08 544 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 PROX1Q92786 737 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 ESAMQ96AP7 390 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 CDX2Q99626 313 aaPredicted RBP18.29■□□□□ 0.52
CCDC50-202ENST00000392456 HDAC8Q9BY41 377 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 TEKT2Q9UIF3 430 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 PLXNA2O75051 1894 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 OR2AG2A6NM03 316 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 AXIN1O15169 862 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 B4GAT1O43505 415 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 TIPRLO75663 272 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 JUNP05412 331 aaKnown RBP18.29■□□□□ 0.52
CCDC50-202ENST00000392456 ATP1B2P14415 290 aaPredicted RBP18.29■□□□□ 0.52
CCDC50-202ENST00000392456 ARHGDIBP52566 201 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 CDH13P55290 713 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 DNAJB13P59910 316 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 ELP6Q0PNE2 266 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 CDH26Q8IXH8 852 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 PTGR2Q8N8N7 351 aaPredicted RBP18.29■□□□□ 0.52
CCDC50-202ENST00000392456 STAG3L4Q8TBR4 150 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 BTN2A2Q8WVV5 523 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 PPWD1Q96BP3 646 aaKnown RBP18.29■□□□□ 0.52
CCDC50-202ENST00000392456 EFCAB1Q9HAE3 211 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 SLC39A1Q9NY26 324 aa18.29■□□□□ 0.52
CCDC50-202ENST00000392456 TRPM6Q9BX84 2022 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 M0R3G1 203 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 UBFD1O14562 309 aaKnown RBP18.28■□□□□ 0.52
CCDC50-202ENST00000392456 KERAO60938 352 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 C7P10643 843 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 NTSR1P30989 418 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 GALEQ14376 348 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 ZMYND11Q15326 602 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 ZNF284Q2VY69 593 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 FBXO43Q4G163 708 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 NXNL2Q5VZ03 156 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 USP51Q70EK9 711 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 FNDC5Q8NAU1 212 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 OR7A2PQ8NGA2 310 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 NDNFQ8TB73 568 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 ZFAND1Q8TCF1 268 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 PMM1Q92871 262 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 BIRC7Q96CA5 298 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 CNDP1Q96KN2 507 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 NSUN5Q96P11 429 aaKnown RBP18.28■□□□□ 0.52
CCDC50-202ENST00000392456 BCL7BQ9BQE9 202 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 ASB1Q9Y576 335 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 TMEM202A6NGA9 273 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 AP3D1O14617 1153 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 GABARAPO95166 117 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 KLF8O95600 359 aaPredicted RBP18.28■□□□□ 0.52
CCDC50-202ENST00000392456 MTHFD1P11586 935 aaKnown RBP18.28■□□□□ 0.52
CCDC50-202ENST00000392456 GRK3P35626 688 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 AGTR2P50052 363 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 CTSCP53634 463 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 RIN1Q13671 783 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 UNC50Q53HI1 259 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 ZNF678Q5SXM1 525 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 CYHR1Q6ZMK1 362 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 PRSS42Q7Z5A4 293 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 VRK3Q8IV63 474 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 HDDC3Q8N4P3 179 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 ZBTB2Q8N680 514 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 OR8K3Q8NH51 312 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 DYNC2LI1Q8TCX1 351 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 GLYATL1Q969I3 302 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 ULK4Q96C45 1275 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 PPP1R36Q96LQ0 422 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 PHF7Q9BWX1 381 aaPredicted RBP18.28■□□□□ 0.52
CCDC50-202ENST00000392456 ROGDIQ9GZN7 287 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 GSTO2Q9H4Y5 243 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 EPS8L2Q9H6S3 715 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 ITM2CQ9NQX7 267 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 KCTD5Q9NXV2 234 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 NFKBIL1Q9UBC1 381 aaPredicted RBP18.28■□□□□ 0.52
CCDC50-202ENST00000392456 ACAD8Q9UKU7 415 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 TMEM5Q9Y2B1 443 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 AUP1Q9Y679 476 aa18.28■□□□□ 0.52
CCDC50-202ENST00000392456 COL4A2P08572 1712 aa18.27■□□□□ 0.52
CCDC50-202ENST00000392456 KRT87PA6NCN2 255 aa18.27■□□□□ 0.52
CCDC50-202ENST00000392456 SUPT3HB4E1H0 165 aa18.27■□□□□ 0.52
CCDC50-202ENST00000392456 PRSS44E7EML9 344 aa18.27■□□□□ 0.52
CCDC50-202ENST00000392456 LZTS3O60299 673 aaPredicted RBP18.27■□□□□ 0.52
CCDC50-202ENST00000392456 HOXD4P09016 255 aaPredicted RBP18.27■□□□□ 0.52
CCDC50-202ENST00000392456 ZNF250P15622 560 aa18.27■□□□□ 0.52
CCDC50-202ENST00000392456 PTX3P26022 381 aaPredicted RBP18.27■□□□□ 0.52
CCDC50-202ENST00000392456 RPS14P62263 151 aaKnown RBP18.27■□□□□ 0.52
CCDC50-202ENST00000392456 C18orf21Q32NC0 220 aaPredicted RBP18.27■□□□□ 0.52
CCDC50-202ENST00000392456 CACHD1Q5VU97 1274 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms