RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 IGSF10Q6WRI0 2623 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 LRRK2Q5S007 2527 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 SYCE1LA8MT33 242 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 ACOT7O00154 380 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 PRRG2O14669 202 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 TYK2P29597 1187 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 ADARP55265 1226 aaKnown RBP7.44□□□□□ -1.22
FAM49A-201ENST00000381323 FAM53BQ14153 422 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 MEP1AQ16819 746 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 PLEKHN1Q494U1 663 aaPredicted RBP7.44□□□□□ -1.22
FAM49A-201ENST00000381323 SFT2D3Q587I9 215 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 LRIG3Q6UXM1 1119 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 CHSY3Q70JA7 882 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 CPEB2Q7Z5Q1 589 aaKnown RBP7.44□□□□□ -1.22
FAM49A-201ENST00000381323 CAND1Q86VP6 1230 aaKnown RBP7.44□□□□□ -1.22
FAM49A-201ENST00000381323 TBC1D20Q96BZ9 403 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 PHACTR1Q9C0D0 580 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 ANKRD10Q9NXR5 420 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 OPTCQ9UBM4 332 aa7.44□□□□□ -1.22
FAM49A-201ENST00000381323 A0A087WUV0 522 aaPredicted RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 IGHV3-20A0A0C4DH32 117 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 KRT38O76015 456 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 IL10P22301 178 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 MFAP5Q13361 173 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 RPS6KA2Q15349 733 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 FAM83EQ2M2I3 478 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 ZNF789Q5FWF6 425 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 FCRLBQ6BAA4 426 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 MBOAT1Q6ZNC8 495 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 THOC6Q86W42 341 aaKnown RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 GRHL3Q8TE85 626 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 LDAHQ9H6V9 325 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 VCX3AQ9NNX9 186 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 PRTFDC1Q9NRG1 225 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 SLC22A14Q9Y267 594 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 OR2A25A4D2G3 310 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 CCDC166P0CW27 439 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 HNMTP50135 292 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 OLR1P78380 273 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 SYT16Q17RD7 645 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 LCTLQ6UWM7 567 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 OR10Q1Q8NGQ4 319 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 LMF1Q96S06 567 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 PLEKHB1Q9UF11 243 aaPredicted RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 NOVA2Q9UNW9 492 aaKnown RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 PDE10AQ9Y233 779 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 HS3ST3B1Q9Y662 390 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 PRSS44E7EML9 344 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 H0YIG0 161 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 K7EM74 188 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 MYO1CO00159 1063 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 UNC5CO95185 931 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 NSA2O95478 260 aaKnown RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 FHP07954 510 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 GP5P40197 560 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 BCL6P41182 706 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 UQCRFS1P47985 274 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 ATP6V0D1P61421 351 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 MSLNQ13421 630 aaPredicted RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 SLBPQ14493 270 aaKnown RBP eCLIP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 RBM20Q5T481 1227 aaKnown RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 KIRREL2Q6UWL6 708 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 RASGEF1CQ8N431 466 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 ANKRD42Q8N9B4 389 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 CD200R1Q8TD46 325 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 REPS1Q96D71 796 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 RBM18Q96H35 190 aaKnown RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 BIRC8Q96P09 236 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 SSUH2Q9Y2M2 353 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 NPIPA5E9PKD4 350 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 CES2O00748 559 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 PHGDHO43175 533 aaKnown RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 SMIM24O75264 130 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 STK16O75716 305 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 RPL21P46778 160 aaKnown RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 LAPTM5Q13571 262 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 ZNF766Q5HY98 468 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 RNASEH2BQ5TBB1 312 aaKnown RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 TMIGD1Q6UXZ0 262 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 RPS19BP1Q86WX3 136 aaKnown RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 NAT8LQ8N9F0 302 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 C2CD4AQ8NCU7 369 aaPredicted RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 STAG3L4Q8TBR4 150 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 CHTF18Q8WVB6 975 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 NUF2Q9BZD4 464 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 ZNF552Q9H707 407 aaPredicted RBP7.43□□□□□ -1.22
FAM49A-201ENST00000381323 NMRAL1Q9HBL8 299 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 NPIPA1Q9UND3 350 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 DMDP11532 3685 aa7.43□□□□□ -1.22
FAM49A-201ENST00000381323 MASP2O00187 686 aa7.42□□□□□ -1.22
FAM49A-201ENST00000381323 CCL21O00585 134 aa7.42□□□□□ -1.22
FAM49A-201ENST00000381323 CASQ2O14958 399 aaPredicted RBP7.42□□□□□ -1.22
FAM49A-201ENST00000381323 HNRNPCL1O60812 293 aaKnown RBP7.42□□□□□ -1.22
FAM49A-201ENST00000381323 DCTN3O75935 186 aa7.42□□□□□ -1.22
FAM49A-201ENST00000381323 TPOP07202 933 aa7.42□□□□□ -1.22
FAM49A-201ENST00000381323 SNRPB2P08579 225 aaKnown RBP7.42□□□□□ -1.22
FAM49A-201ENST00000381323 IMPA1P29218 277 aa7.42□□□□□ -1.22
FAM49A-201ENST00000381323 PEBP1P30086 187 aaKnown RBP7.42□□□□□ -1.22
FAM49A-201ENST00000381323 POU4F1Q01851 419 aa7.42□□□□□ -1.22
FAM49A-201ENST00000381323 C2orf54Q08AI8 447 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms