RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 LIPMQ5VYY2 423 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 COX15Q7KZN9 410 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 VN1R5Q7Z5H4 357 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 SRFBP1Q8NEF9 429 aaKnown RBP12.57□□□□□ -0.4
CKAP2-202ENST00000378034 UTP15Q8TED0 518 aaKnown RBP12.57□□□□□ -0.4
CKAP2-202ENST00000378034 ZNF473Q8WTR7 871 aaKnown RBP12.57□□□□□ -0.4
CKAP2-202ENST00000378034 CCT6BQ92526 530 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 GAL3ST3Q96A11 431 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 SMIM10Q96HG1 83 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 FAM111AQ96PZ2 611 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 ZNF382Q96SR6 550 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 C12orf65Q9H3J6 166 aaKnown RBP12.57□□□□□ -0.4
CKAP2-202ENST00000378034 VIPAS39Q9H9C1 493 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 MKKSQ9NPJ1 570 aaPredicted RBP12.57□□□□□ -0.4
CKAP2-202ENST00000378034 ZNF282Q9UDV7 671 aaPredicted RBP12.57□□□□□ -0.4
CKAP2-202ENST00000378034 TRPS1Q9UHF7 1281 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 TCFL5Q9UL49 500 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 MRPS2Q9Y399 296 aaKnown RBP12.57□□□□□ -0.4
CKAP2-202ENST00000378034 RNF11Q9Y3C5 154 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 MAP4K5Q9Y4K4 846 aa12.57□□□□□ -0.4
CKAP2-202ENST00000378034 IGLV3-12A0A075B6K2 115 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 A0A088AWK7 358 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 TM9SF1O15321 606 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 GALR3O60755 368 aaPredicted RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 PCNAP12004 261 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 CREB1P16220 341 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 ZNF10P21506 573 aaPredicted RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 CDH13P55290 713 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 PKNOX1P55347 436 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 OCA2Q04671 838 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 TGM3Q08188 693 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 LCP2Q13094 533 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 TMEM35AQ53FP2 167 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 TOR1AIP1Q5JTV8 583 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 METTL27Q8N6F8 245 aaPredicted RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 OR4F6Q8NGB9 312 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 OR9A4Q8NGU2 314 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 OR2Y1Q8NGV0 311 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 ZCCHC10Q8TBK6 192 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 TRPC4APQ8TEL6 797 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 SREK1Q8WXA9 508 aaKnown RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 MS4A6EQ96DS6 147 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 CMTM7Q96FZ5 175 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 TMBIM4Q9HC24 238 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 CPNE5Q9HCH3 593 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 SLC17A7Q9P2U7 560 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 PPT2Q9UMR5 302 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 NAALAD2Q9Y3Q0 740 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 MAU2Q9Y6X3 613 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 USP24Q9UPU5 2620 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 VSTM2BA6NLU5 285 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 FOXE1O00358 373 aaPredicted RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 TRIM13O60858 407 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 KLF7O75840 302 aaPredicted RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 KLHL18O94889 574 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 ZNF888P0CJ79 500 aaPredicted RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 IL1RNP18510 177 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 WT1P19544 449 aaPredicted RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 IL10P22301 178 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 FOLR3P41439 243 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 ARFIP1P53367 373 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 NAGLUP54802 743 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 CXADRP78310 365 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 PCLAFQ15004 111 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 ZRSR2Q15696 482 aaKnown RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 NKG7Q16617 165 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 CPSF6Q16630 551 aaKnown RBP eCLIP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 CFAP157Q5JU67 520 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 CHSY3Q70JA7 882 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 HOMEZQ8IX15 550 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 CCNYL1Q8N7R7 359 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 AMER3Q8N944 861 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 OR2L5Q8NG80 312 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 HUS1BQ8NHY5 278 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 WDR20Q8TBZ3 569 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 NACC2Q96BF6 587 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 FAR2Q96K12 515 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 CDK15Q96Q40 435 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 MS4A8Q9BY19 250 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 TGIF2Q9GZN2 237 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 REXO4Q9GZR2 422 aaKnown RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 GSTO2Q9H4Y5 243 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 KLHL31Q9H511 634 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 PRORYQ9H606 182 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 C14orf105Q9NVL8 296 aa12.56□□□□□ -0.4
CKAP2-202ENST00000378034 MRPS18BQ9Y676 258 aaKnown RBP12.56□□□□□ -0.4
CKAP2-202ENST00000378034 ZWINTO95229 277 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 TBX6O95947 436 aaPredicted RBP12.55□□□□□ -0.4
CKAP2-202ENST00000378034 PTX3P26022 381 aaPredicted RBP12.55□□□□□ -0.4
CKAP2-202ENST00000378034 HNRNPH1P31943 449 aaKnown RBP12.55□□□□□ -0.4
CKAP2-202ENST00000378034 SSPNQ14714 243 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 SLC9A5Q14940 896 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 UGT8Q16880 541 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 FRG2Q64ET8 278 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 TRIM40Q6P9F5 258 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 FRMD7Q6ZUT3 714 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 GPRIN3Q6ZVF9 776 aa12.55□□□□□ -0.4
CKAP2-202ENST00000378034 RPS27LQ71UM5 84 aaKnown RBP12.55□□□□□ -0.4
CKAP2-202ENST00000378034 PDSS2Q86YH6 399 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms