RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CDKL1Q00532 357 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 DEFB134Q4QY38 66 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 RBM20Q5T481 1227 aaKnown RBP13.87□□□□□ -0.19
HDAC6-204ENST00000376643 MBOAT1Q6ZNC8 495 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 GDF7Q7Z4P5 450 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 RPS19BP1Q86WX3 136 aaKnown RBP13.87□□□□□ -0.19
HDAC6-204ENST00000376643 PDSS2Q86YH6 399 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 AGGF1Q8N302 714 aaeCLIP13.87□□□□□ -0.19
HDAC6-204ENST00000376643 POGLUT1Q8NBL1 392 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 ZNF740Q8NDX6 193 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 ADAMTS18Q8TE60 1221 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 VPS39Q96JC1 886 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 SEC16BQ96JE7 1060 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 MACROD1Q9BQ69 325 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 GPAMQ9HCL2 828 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 LANCL2Q9NS86 450 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 ZFATQ9P243 1243 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 LRFN1Q9P244 771 aa13.87□□□□□ -0.19
HDAC6-204ENST00000376643 FAM227AF5H4B4 570 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 CDC123O75794 336 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-204ENST00000376643 TSPAN12O95859 305 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 SP1P08047 785 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 F7P08709 466 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-204ENST00000376643 COX6B1P14854 86 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 ELAVL4P26378 380 aaKnown RBP13.86□□□□□ -0.19
HDAC6-204ENST00000376643 CD96P40200 585 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 CYB561P49447 251 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 EFNA3P52797 238 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 ARL4CP56559 192 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 STXBP1P61764 594 aaKnown RBP13.86□□□□□ -0.19
HDAC6-204ENST00000376643 RCN2Q14257 317 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 TERF2Q15554 542 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 ZNF630Q2M218 657 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-204ENST00000376643 TEDDM1Q5T9Z0 273 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 SLC25A25Q6KCM7 469 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 ADAMTSL2Q86TH1 951 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 MCEMP1Q8IX19 187 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 GHDCQ8N2G8 530 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 PYCR2Q96C36 320 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 PTCHD1Q96NR3 888 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 CAPS2Q9BXY5 557 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 PITHD1Q9GZP4 211 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-204ENST00000376643 PRDM9Q9NQV7 894 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 SH2B3Q9UQQ2 575 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 MMACHCQ9Y4U1 282 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 CENPEQ02224 2701 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 ITPR2Q14571 2701 aa13.86□□□□□ -0.19
HDAC6-204ENST00000376643 CROCCQ5TZA2 2017 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 ZNF860A6NHJ4 632 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 SAGE2PA6NJ88 616 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 CHST10O43529 356 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 H2AFYO75367 372 aaKnown RBP13.85□□□□□ -0.19
HDAC6-204ENST00000376643 SLC25A12O75746 678 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 GUCA1CO95843 209 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 SERPINA6P08185 405 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 ZNF888P0CJ79 500 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-204ENST00000376643 ZNF24P17028 368 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 GABRB3P28472 473 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 HTR1EP28566 365 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 REEP5Q00765 189 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 TIAL1Q01085 375 aaKnown RBP eCLIP13.85□□□□□ -0.19
HDAC6-204ENST00000376643 FCRLBQ6BAA4 426 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 Q6ZPB1 254 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-204ENST00000376643 FRA10AC1Q70Z53 315 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 SPPL2CQ8IUH8 684 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 SLC35F6Q8N357 371 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 C7orf57Q8NEG2 295 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 ELP5Q8TE02 316 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 NEIL2Q969S2 332 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 FAR2Q96K12 515 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 FRMD6Q96NE9 622 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 OLFM1Q99784 485 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 EGFL8Q99944 293 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 RBCK1Q9BYM8 510 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 DDX47Q9H0S4 455 aaKnown RBP13.85□□□□□ -0.19
HDAC6-204ENST00000376643 KLHL1Q9NR64 748 aa13.85□□□□□ -0.19
HDAC6-204ENST00000376643 MRPS33Q9Y291 106 aaKnown RBP13.85□□□□□ -0.19
HDAC6-204ENST00000376643 KLF13Q9Y2Y9 288 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-204ENST00000376643 NPIPA5E9PKD4 350 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 CLDN4O14493 209 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 PRRG2O14669 202 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 B4GALT2O60909 372 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 ABOP16442 354 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 ZNF37AP17032 561 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-204ENST00000376643 GNAZP19086 355 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 SLC12A2P55011 1212 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 MAPKAPK3Q16644 382 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 KCTD19Q17RG1 926 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-204ENST00000376643 STEAP4Q687X5 459 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 SPINK14Q6IE38 97 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 NXPE4Q6UWF7 544 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 GALNTL5Q7Z4T8 443 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 TMPRSS11BQ86T26 416 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 THOC6Q86W42 341 aaKnown RBP13.84□□□□□ -0.19
HDAC6-204ENST00000376643 SRRM1Q8IYB3 904 aaKnown RBP13.84□□□□□ -0.19
HDAC6-204ENST00000376643 CYP4X1Q8N118 509 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 KRT78Q8N1N4 520 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 TCAIMQ8N3R3 496 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 OR5T3Q8NGG3 340 aa13.84□□□□□ -0.19
HDAC6-204ENST00000376643 UTP15Q8TED0 518 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms