RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 GRIN2CQ14957 1233 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 RGNQ15493 299 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 PTOV1Q86YD1 416 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 ANKRD13BQ86YJ7 626 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 ETFBKMTQ8IXQ9 262 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 BPIFB6Q8NFQ5 453 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 OR52N2Q8NGI0 321 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 CXorf40AQ8TE69 158 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 FCGR1BQ92637 280 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 RAD51AP1Q96B01 352 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 TPD52L3Q96J77 140 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 QRFPRQ96P65 431 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 OR4K3Q96R72 315 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 LHPPQ9H008 270 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 PCBD2Q9H0N5 130 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 TTYH1Q9H313 450 aaPredicted RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 THUMPD1Q9NXG2 353 aaKnown RBP11.76□□□□□ -0.53
UBR4-203ENST00000375225 ANGPT4Q9Y264 503 aa11.76□□□□□ -0.53
UBR4-203ENST00000375225 PRRC2BQ5JSZ5 2229 aaKnown RBP11.75□□□□□ -0.53
UBR4-203ENST00000375225 C1orf226A1L170 272 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 PIPSLA2A3N6 862 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 TMEM202A6NGA9 273 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 A8MVJ9 347 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 SLC22A1O15245 554 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 GPR37L1O60883 481 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 NDUFS2O75306 463 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 ANXA8P13928 327 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 ZNF12P17014 697 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 PRKACGP22612 351 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 CHI3L1P36222 383 aaPredicted RBP11.75□□□□□ -0.53
UBR4-203ENST00000375225 PIGAP37287 484 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 PRIM2P49643 509 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 PLA2G16P53816 162 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 C21orf59P57076 290 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 RAE1P78406 368 aaKnown RBP11.75□□□□□ -0.53
UBR4-203ENST00000375225 ARHGAP19Q14CB8 494 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 C16orf72Q14CZ0 275 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 ZNF630Q2M218 657 aaPredicted RBP11.75□□□□□ -0.53
UBR4-203ENST00000375225 HNRNPA1L2Q32P51 320 aaKnown RBP11.75□□□□□ -0.53
UBR4-203ENST00000375225 PROX2Q3B8N5 592 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 TMEM52BQ4KMG9 183 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 IFI44LQ53G44 452 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 SLC44A4Q53GD3 710 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 ZNF648Q5T619 568 aaPredicted RBP11.75□□□□□ -0.53
UBR4-203ENST00000375225 XAF1Q6GPH4 301 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 NXPE4Q6UWF7 544 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 LCTLQ6UWM7 567 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 ANGPTL8Q6UXH0 198 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 PAGE2Q7Z2X7 111 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 TMEM179BQ7Z7N9 219 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 C12orf40Q86WS4 652 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 CLECL1Q8IZS7 167 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 HS3ST5Q8IZT8 346 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 GPR156Q8NFN8 814 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 OR2L2Q8NH16 312 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 ZNF480Q8WV37 535 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 SORCS1Q8WY21 1168 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 NEIL2Q969S2 332 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 MSLNLQ96KJ4 702 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 KXD1Q9BQD3 176 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 WRAP53Q9BUR4 548 aaKnown RBP11.75□□□□□ -0.53
UBR4-203ENST00000375225 PITHD1Q9GZP4 211 aaPredicted RBP11.75□□□□□ -0.53
UBR4-203ENST00000375225 DMRT3Q9NQL9 472 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 SPASTQ9UBP0 616 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 MBD1Q9UIS9 605 aaPredicted RBP11.75□□□□□ -0.53
UBR4-203ENST00000375225 CD207Q9UJ71 328 aa11.75□□□□□ -0.53
UBR4-203ENST00000375225 DNMT3AQ9Y6K1 912 aaPredicted RBP11.75□□□□□ -0.53
UBR4-203ENST00000375225 COL4A3Q01955 1670 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 A0A1B0GVG6 124 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 A0A1W2PPW3 197 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 PTGES3LE9PB15 166 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 hCG_2039718K7EN88 272 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 NPC1O15118 1278 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 RGS10O43665 173 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 FAM20BO75063 409 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 MATN1P21941 496 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 LTBRP36941 435 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 CRATP43155 626 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 ST13P50502 369 aaKnown RBP11.74□□□□□ -0.53
UBR4-203ENST00000375225 SELENOWP63302 87 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 TEKQ02763 1124 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 C2orf80Q0P641 193 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 TMED1Q13445 227 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 TSTA3Q13630 321 aaPredicted RBP11.74□□□□□ -0.53
UBR4-203ENST00000375225 RAPSNQ13702 412 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 COL19A1Q14993 1142 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 CTU2Q2VPK5 515 aaKnown RBP11.74□□□□□ -0.53
UBR4-203ENST00000375225 PRAMEF14Q5SWL7 426 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 PRAMEF13Q5VWM6 474 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 FAM46CQ5VWP2 391 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 GTF2IRD2BQ6EKJ0 949 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 FAHD1Q6P587 224 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 C16orf87Q6PH81 154 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 CRTC3Q6UUV7 619 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 NUDT18Q6ZVK8 323 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 COMMD6Q7Z4G1 85 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 GTF2IRD2Q86UP8 949 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 P3H2Q8IVL5 708 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 DCUN1D3Q8IWE4 304 aa11.74□□□□□ -0.53
UBR4-203ENST00000375225 DEPDC4Q8N2C3 294 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms