RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ZMAT3Q9HA38 289 aaKnown RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 WDR41Q9HAD4 459 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 SYTL2Q9HCH5 934 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 RIMS3Q9UJD0 308 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 STOML2Q9UJZ1 356 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 TBC1D30Q9Y2I9 924 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 ASB3Q9Y575 518 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 PIKFYVEQ9Y2I7 2098 aa4.67□□□□□ -1.66
USP48-202ENST00000374730 TNRC18O15417 2968 aaPredicted RBP4.67□□□□□ -1.66
USP48-202ENST00000374730 PLXNB3Q9ULL4 1909 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 A0A0D9SEW6 157 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 OR51F1A6NGY5 319 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 C2orf81A6NN90 581 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 SYCE1LA8MT33 242 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 STX16-NPEPL1H3BU86 382 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 H7C0S8 307 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PSMD12O00232 456 aaPredicted RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 CCL22O00626 93 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 UBFD1O14562 309 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 STX16O14662 325 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 ACOT8O14734 319 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 AZIN1O14977 448 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PFDN6O15212 129 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 COCHO43405 550 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 KLK8O60259 260 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 GPC4O75487 556 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 GJB3O75712 270 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 SRP72O76094 671 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 SUPT7LO94864 414 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 CDK14O94921 469 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 GJB5O95377 273 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 CXCL10P02778 98 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PYGLP06737 847 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 LYNP07948 512 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 RPS17P08708 135 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 CHRM5P08912 532 aaPredicted RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 ENO3P13929 434 aaPredicted RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 CD1EP15812 388 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 HMGA1P17096 107 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 XRCC1P18887 633 aaPredicted RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 MPGP29372 298 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PPM1AP35813 382 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 DPP6P42658 865 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 RGRP47804 291 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PPP3CCP48454 512 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 HSPA13P48723 471 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 TTPAP49638 278 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 CLCN4P51793 760 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PLK1P53350 603 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 AQP4P55087 323 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 ADARP55265 1226 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 PRMT2P55345 433 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 STX1BP61266 288 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PSME3P61289 254 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 FOXM1Q08050 763 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 TRAP1Q12931 704 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 LCP2Q13094 533 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 SLC13A2Q13183 592 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 OR4D1Q15615 310 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 TRIP10Q15642 601 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 USP41Q3LFD5 358 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 UGT3A2Q3SY77 523 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PLA1AQ53H76 456 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 SAMD4BQ5PRF9 694 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 HECTD3Q5T447 861 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 LPCAT4Q643R3 524 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 TPGS2Q68CL5 300 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 SLC18B1Q6NT16 456 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PRMT9Q6P2P2 845 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PRSS55Q6UWB4 352 aaPredicted RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 EFL1Q7Z2Z2 1120 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 LDB1Q86U70 411 aaPredicted RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 TMEM173Q86WV6 379 aaPredicted RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 TICAM1Q8IUC6 712 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 GALNT16Q8N428 558 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 MARVELD2Q8N4S9 558 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 Q8N9P0 234 aaPredicted RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 TERB1Q8NA31 727 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PNLDC1Q8NA58 520 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 OR52K2Q8NGK3 314 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 STAG3L4Q8TBR4 150 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 CD99L2Q8TCZ2 262 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 BPIFB1Q8TDL5 484 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 KIAA1191Q96A73 305 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 ROPN1LQ96C74 230 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 ASB9Q96DX5 294 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 SPDL1Q96EA4 605 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PHF21BQ96EK2 531 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 C19orf60Q96EN9 201 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 MARK4Q96L34 752 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 PPP1R36Q96LQ0 422 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 CDRT15Q96T59 188 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 NPAS2Q99743 824 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 MACROD1Q9BQ69 325 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 NUSAP1Q9BXS6 441 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 UNKQ9C0B0 810 aaKnown RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 FAM192AQ9GZU8 254 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 MS4A7Q9GZW8 240 aaPredicted RBP4.66□□□□□ -1.66
USP48-202ENST00000374730 CCDC68Q9H2F9 335 aa4.66□□□□□ -1.66
USP48-202ENST00000374730 EBF3Q9H4W6 596 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms