RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 CMTM7Q96FZ5 175 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 ZNF382Q96SR6 550 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 TRMOQ9BU70 441 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 SLC6A16Q9GZN6 736 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 REXO4Q9GZR2 422 aaKnown RBP13.08□□□□□ -0.32
SSR4-202ENST00000370085 ACTL8Q9H568 366 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 ELOVL6Q9H5J4 265 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 COPS7BQ9H9Q2 264 aaPredicted RBP13.08□□□□□ -0.32
SSR4-202ENST00000370085 MKKSQ9NPJ1 570 aaPredicted RBP13.08□□□□□ -0.32
SSR4-202ENST00000370085 C14orf105Q9NVL8 296 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 NMRK1Q9NWW6 199 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 TRPC4Q9UBN4 977 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 TRPS1Q9UHF7 1281 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 ZNF490Q9ULM2 529 aaPredicted RBP13.08□□□□□ -0.32
SSR4-202ENST00000370085 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 MAP4K5Q9Y4K4 846 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 MAU2Q9Y6X3 613 aa13.08□□□□□ -0.32
SSR4-202ENST00000370085 DSPP15924 2871 aaKnown RBP13.07□□□□□ -0.32
SSR4-202ENST00000370085 A0A0A6YYC8 382 aaPredicted RBP13.07□□□□□ -0.32
SSR4-202ENST00000370085 LRIT2A6NDA9 550 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 I3L1I5 382 aaPredicted RBP13.07□□□□□ -0.32
SSR4-202ENST00000370085 EFSO43281 561 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 TYROBPO43914 113 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 CREG1O75629 220 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 KRT6AP02538 564 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 KRT6BP04259 564 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 ZNF888P0CJ79 500 aaPredicted RBP13.07□□□□□ -0.32
SSR4-202ENST00000370085 NEFHP12036 1026 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 IL1RNP18510 177 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 CD22P20273 847 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 IL10P22301 178 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 PTX3P26022 381 aaPredicted RBP13.07□□□□□ -0.32
SSR4-202ENST00000370085 ITPKBP27987 946 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 HMOX2P30519 316 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 OR1D4P47884 311 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 KRT6CP48668 564 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 RAP1GDS1P52306 607 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 DDX39BQ13838 428 aaKnown RBP13.07□□□□□ -0.32
SSR4-202ENST00000370085 RCN2Q14257 317 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 SLC9A5Q14940 896 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 ZRSR2Q15696 482 aaKnown RBP13.07□□□□□ -0.32
SSR4-202ENST00000370085 UNC50Q53HI1 259 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 TNFAIP8L3Q5GJ75 292 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 TOR1AIP1Q5JTV8 583 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 FRG2Q64ET8 278 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 FAM198BQ6UWH4 519 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 C10orf107Q8IVU9 208 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 OR2L5Q8NG80 312 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 OR4F6Q8NGB9 312 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 OR52B6Q8NGF0 335 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 OR9A4Q8NGU2 314 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 CREB3L4Q8TEY5 395 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 CNDP1Q96KN2 507 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 NSUN5Q96P11 429 aaKnown RBP13.07□□□□□ -0.32
SSR4-202ENST00000370085 CATSPER2Q96P56 530 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 IP6K3Q96PC2 410 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 KCNC2Q96PR1 638 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 FRG2BQ96QU4 278 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 MACROD1Q9BQ69 325 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 SLC29A3Q9BZD2 475 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 SLC26A1Q9H2B4 701 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 TMBIM4Q9HC24 238 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 EML4Q9HC35 981 aaKnown RBP13.07□□□□□ -0.32
SSR4-202ENST00000370085 ZBTB26Q9HCK0 441 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 SLC17A7Q9P2U7 560 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 TCFL5Q9UL49 500 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 RNF11Q9Y3C5 154 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 NAALAD2Q9Y3Q0 740 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 PKD1L2Q7Z442 2459 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 PTPRQQ9UMZ3 2332 aa13.07□□□□□ -0.32
SSR4-202ENST00000370085 CELSR3Q9NYQ7 3312 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 FER1L5A0AVI2 2057 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 K7ENP7 123 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 FOXE1O00358 373 aaPredicted RBP13.06□□□□□ -0.32
SSR4-202ENST00000370085 ERI3O43414 337 aaKnown RBP13.06□□□□□ -0.32
SSR4-202ENST00000370085 PRAMEF4O60810 478 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 KLHL18O94889 574 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 IGHEP01854 428 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 ENO1P06733 434 aaKnown RBP13.06□□□□□ -0.32
SSR4-202ENST00000370085 SERPINB5P36952 375 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 ARFIP1P53367 373 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 CXADRP78310 365 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 ZNF33BQ06732 778 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 TRAF3Q13114 568 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 PCLAFQ15004 111 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 DEFB134Q4QY38 66 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 AGBL2Q5U5Z8 902 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 PRAMEF9Q5VWM5 478 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 INO80CQ6PI98 192 aaPredicted RBP13.06□□□□□ -0.32
SSR4-202ENST00000370085 FRMD7Q6ZUT3 714 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 RAB43Q86YS6 212 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 NUDCD3Q8IVD9 361 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 ARHGEF39Q8N4T4 335 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 AFAP1L2Q8N4X5 818 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 OR2Y1Q8NGV0 311 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 HUS1BQ8NHY5 278 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 METTL6Q8TCB7 284 aa13.06□□□□□ -0.32
SSR4-202ENST00000370085 UTP15Q8TED0 518 aaKnown RBP13.06□□□□□ -0.32
SSR4-202ENST00000370085 ZNF473Q8WTR7 871 aaKnown RBP13.06□□□□□ -0.32
SSR4-202ENST00000370085 NACC2Q96BF6 587 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms