RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 PRAMEF14Q5SWL7 426 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 PRAMEF13Q5VWM6 474 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 TAC4Q86UU9 113 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 SLC22A8Q8TCC7 542 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 GPR20Q99678 358 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 OR10A4Q9H209 315 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 ACTR3BQ9P1U1 418 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 NDRG2Q9UN36 371 aaKnown RBP12.09□□□□□ -0.47
HCFC1-202ENST00000369984 TLR6Q9Y2C9 796 aa12.09□□□□□ -0.47
HCFC1-202ENST00000369984 FOXN2P32314 431 aa12.08□□□□□ -0.47
HCFC1-202ENST00000369984 SSX2Q16385 188 aa12.08□□□□□ -0.47
HCFC1-202ENST00000369984 RNF151Q2KHN1 245 aa12.08□□□□□ -0.47
HCFC1-202ENST00000369984 ESX1Q8N693 406 aa12.08□□□□□ -0.47
HCFC1-202ENST00000369984 ABHD5Q8WTS1 349 aa12.08□□□□□ -0.47
HCFC1-202ENST00000369984 HERC2P3Q9BVR0 1158 aa12.08□□□□□ -0.47
HCFC1-202ENST00000369984 BEX2Q9BXY8 128 aa12.08□□□□□ -0.47
HCFC1-202ENST00000369984 BEX1Q9HBH7 125 aa12.08□□□□□ -0.47
HCFC1-202ENST00000369984 POLE4Q9NR33 117 aa12.08□□□□□ -0.47
HCFC1-202ENST00000369984 SPATA31D1Q6ZQQ2 1576 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 CARD16Q5EG05 197 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 SIRPB2Q5JXA9 342 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 FRG2Q64ET8 278 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 C1orf94Q6P1W5 598 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 PAQR3Q6TCH7 311 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 ASB15Q8WXK1 588 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 FRG2BQ96QU4 278 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 DTLQ9NZJ0 730 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 IGSF9Q9P2J2 1179 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 NKX1-2Q9UD57 310 aaPredicted RBP12.08□□□□□ -0.48
HCFC1-202ENST00000369984 SLC22A14Q9Y267 594 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 ARFGEF2Q9Y6D5 1785 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 TRBC2A0A5B9 178 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 MT-ND5P03915 603 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 RPS3P23396 243 aaKnown RBP eCLIP12.08□□□□□ -0.483e-8■■■□□ 15.4
HCFC1-202ENST00000369984 CDH11P55287 796 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 TAS2R43P59537 309 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 ZNF404Q494X3 552 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 LHFPL3Q86UP9 236 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 VGLL2Q8N8G2 317 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 ARL14EPQ8N8R7 260 aaPredicted RBP12.08□□□□□ -0.48
HCFC1-202ENST00000369984 SDHAF3Q9NRP4 125 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 PADI3Q9ULW8 664 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 ZNF638Q14966 1978 aaKnown RBP12.08□□□□□ -0.48
HCFC1-202ENST00000369984 OR51F1A6NGY5 319 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 GABRDO14764 452 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 OIP5O43482 229 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 SLITRK5O94991 958 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 IFNA4P05014 189 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 ST3GAL3Q11203 375 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 HNRNPA0Q13151 305 aaKnown RBP12.08□□□□□ -0.48
HCFC1-202ENST00000369984 HNRNPDQ14103 355 aaKnown RBP12.08□□□□□ -0.48
HCFC1-202ENST00000369984 SPATC1Q76KD6 591 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 SNX27Q96L92 541 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 TMPRSS11EQ9UL52 423 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 SLC38A8A6NNN8 435 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 HLA-DPB1P04440 258 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 CREB1P16220 341 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 LMO2P25791 158 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 KIAA0930Q6ICG6 404 aaPredicted RBP12.08□□□□□ -0.48
HCFC1-202ENST00000369984 NAPRTQ6XQN6 538 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 GPAT4Q86UL3 456 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 PLA2G15Q8NCC3 412 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 OR10Q1Q8NGQ4 319 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 TMEM41AQ96HV5 264 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 ALPK1Q96QP1 1244 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 C12orf71A8MTZ7 269 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 LRRN3E7EW58 273 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 TNFRSF10BO14763 440 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 WNT9AO14904 365 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 XRCC1P18887 633 aaPredicted RBP12.08□□□□□ -0.48
HCFC1-202ENST00000369984 RIN1Q13671 783 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 NOXRED1Q6NXP6 359 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 C3orf58Q8NDZ4 430 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 CASTOR1Q8WTX7 329 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 LRRN3Q9H3W5 708 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 DNAJC27Q9NZQ0 273 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 A8MVJ9 347 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 VILLO15195 856 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 RNF13O43567 381 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 IFNA10P01566 189 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 GNMTQ14749 295 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 LRRC66Q68CR7 880 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 FAM83HQ6ZRV2 1179 aaPredicted RBP12.08□□□□□ -0.48
HCFC1-202ENST00000369984 STK35Q8TDR2 534 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 ZNF514Q96K75 400 aaPredicted RBP12.08□□□□□ -0.48
HCFC1-202ENST00000369984 CGREF1Q99674 301 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 ENAMQ9NRM1 1142 aa12.08□□□□□ -0.48
HCFC1-202ENST00000369984 TTC24A2A3L6 582 aaPredicted RBP12.07□□□□□ -0.48
HCFC1-202ENST00000369984 ABCB7O75027 752 aa12.07□□□□□ -0.48
HCFC1-202ENST00000369984 HLA-DQB2P05538 268 aa12.07□□□□□ -0.48
HCFC1-202ENST00000369984 CSNK2A2P19784 350 aaPredicted RBP12.07□□□□□ -0.48
HCFC1-202ENST00000369984 CCND3P30281 292 aaPredicted RBP12.07□□□□□ -0.48
HCFC1-202ENST00000369984 CSKP41240 450 aa12.07□□□□□ -0.48
HCFC1-202ENST00000369984 DGKQP52824 942 aa12.07□□□□□ -0.48
HCFC1-202ENST00000369984 OC90Q02509 493 aaPredicted RBP12.07□□□□□ -0.48
HCFC1-202ENST00000369984 PON3Q15166 354 aa12.07□□□□□ -0.48
HCFC1-202ENST00000369984 SMG8Q8ND04 991 aaKnown RBP12.07□□□□□ -0.48
HCFC1-202ENST00000369984 FBXO22Q8NEZ5 403 aa12.07□□□□□ -0.48
HCFC1-202ENST00000369984 CMTM7Q96FZ5 175 aa12.07□□□□□ -0.48
HCFC1-202ENST00000369984 TSTD3H0UI37 97 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms