RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ANKHQ9HCJ1 492 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 SPRR3Q9UBC9 169 aa13.6□□□□□ -0.23
VAMP4-202ENST00000367740 DRG1Q9Y295 367 aaKnown RBP13.6□□□□□ -0.23
VAMP4-202ENST00000367740 TRBV11-1A0A0K0K1C0 115 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 KDM4EB2RXH2 506 aaPredicted RBP13.59□□□□□ -0.23
VAMP4-202ENST00000367740 CLDN4O14493 209 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 PHF1O43189 567 aaPredicted RBP13.59□□□□□ -0.23
VAMP4-202ENST00000367740 KIF5CO60282 957 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 DNAJB6O75190 326 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 CCNDBP1O95273 360 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 GOT2P00505 430 aaKnown RBP13.59□□□□□ -0.23
VAMP4-202ENST00000367740 FHP07954 510 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 IL10P22301 178 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 WNT3P56703 355 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 CCDC38Q502W7 563 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 ZNF534Q76KX8 674 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 OR9A1PQ8NGU1 263 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 SLC35G2Q8TBE7 412 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 MAGEC3Q8TD91 643 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 SMPDL3BQ92485 455 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 ALS2CR12Q96Q35 445 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 TTC1Q99614 292 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 TSR3Q9UJK0 312 aaKnown RBP13.59□□□□□ -0.23
VAMP4-202ENST00000367740 ERVK-11Q9UQG0 969 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 NAALAD2Q9Y3Q0 740 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 PCDHA3Q9Y5H8 950 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 MEGF8Q7Z7M0 2845 aa13.59□□□□□ -0.23
VAMP4-202ENST00000367740 DSCAMO60469 2012 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 NID1P14543 1247 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 CEACAM8P31997 349 aaPredicted RBP13.58□□□□□ -0.24
VAMP4-202ENST00000367740 SSR4P51571 173 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 DMTNQ08495 405 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 AFTPHQ6ULP2 937 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 GK5Q6ZS86 529 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 RBM43Q6ZSC3 357 aaKnown RBP13.58□□□□□ -0.24
VAMP4-202ENST00000367740 ULK2Q8IYT8 1036 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 KCT2Q8NC54 265 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 PPFIBP2Q8ND30 876 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 PPP1R14CQ8TAE6 165 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 FOPNLQ96NB1 174 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 NAP1L5Q96NT1 182 aaPredicted RBP13.58□□□□□ -0.24
VAMP4-202ENST00000367740 PPP1R2P1Q96PQ5 205 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 ZNF629Q9UEG4 869 aaPredicted RBP13.58□□□□□ -0.24
VAMP4-202ENST00000367740 SLC2A6Q9UGQ3 507 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 ADGRE2Q9UHX3 823 aa13.58□□□□□ -0.24
VAMP4-202ENST00000367740 ZNF223Q9UK11 482 aaPredicted RBP13.58□□□□□ -0.24
VAMP4-202ENST00000367740 A0A1B0GTH6 734 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 ATP6AP2A0A1C7CYW4 349 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 A8MVJ9 347 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 APOC4-APOC2K7ER74 178 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 MYO1CO00159 1063 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 CES2O00748 559 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 ATP6AP2O75787 350 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 MATN4O95460 622 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 APOC2P02655 101 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 TMEM253P0C7T8 217 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 ZNF136P52737 540 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 PNLIPRP1P54315 467 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 ABATP80404 500 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 ARHGAP19Q14CB8 494 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 MAATS1Q7Z4T9 603 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 LDB1Q86U70 411 aaPredicted RBP13.57□□□□□ -0.24
VAMP4-202ENST00000367740 TBC1D20Q96BZ9 403 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 LRRC45Q96CN5 670 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 CAPZA3Q96KX2 299 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 CCL19Q99731 98 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 LDAHQ9H6V9 325 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 IL1RL2Q9HB29 575 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 ANO10Q9NW15 660 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 HPF1Q9NWY4 346 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 FBXW2Q9UKT8 454 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 NPFFR2Q9Y5X5 522 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 CR1P17927 2039 aa13.57□□□□□ -0.24
VAMP4-202ENST00000367740 KCNE1BA0A087WTH5 132 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 IGKV3D-11A0A0A0MRZ8 115 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 TCRBV16S1A1N1A0A5B0 115 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 A8MUA0 341 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 H7BY64 318 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 PRMT5O14744 637 aaPredicted RBP13.56□□□□□ -0.24
VAMP4-202ENST00000367740 PRKNO60260 465 aaPredicted RBP13.56□□□□□ -0.24
VAMP4-202ENST00000367740 HCN1O60741 890 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 OR6B1O95007 311 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 MAOAP21397 527 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 JAK1P23458 1154 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 CLCN2P51788 898 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 RPS15AP62244 130 aaKnown RBP13.56□□□□□ -0.24
VAMP4-202ENST00000367740 BTG2P78543 158 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 FOXO1Q12778 655 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 TRIM14Q14142 442 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 HYAL4Q2M3T9 481 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 ANKRD20A4Q4UJ75 823 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 HEPHL1Q6MZM0 1159 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 IL20RBQ6UXL0 311 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 QSOX2Q6ZRP7 698 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 BBS12Q6ZW61 710 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 OTOAQ7RTW8 1153 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 GPALPP1Q8IXQ4 340 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 FBXW8Q8N3Y1 598 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 B3GNT7Q8NFL0 401 aa13.56□□□□□ -0.24
VAMP4-202ENST00000367740 OR4L1Q8NH43 312 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms