RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 B3GNT4Q9C0J1 378 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TMEM168Q9H0V1 697 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 TCEAL2Q9H3H9 227 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 EPHX3Q9H6B9 360 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 SLC25A37Q9NYZ2 338 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 ZIM2Q9NZV7 527 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 THEGQ9P2T0 379 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.89□□□□□ -1.63
ATXN3-202ENST00000359366 GPR34Q9UPC5 381 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 ERVK-11Q9UQG0 969 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 BTBD3Q9Y2F9 522 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 NEUROG3Q9Y4Z2 214 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 PCDHA9Q9Y5H5 950 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 KCNE2Q9Y6J6 123 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 NINQ8N4C6 2090 aa4.89□□□□□ -1.63
ATXN3-202ENST00000359366 GNG14A0A1W2PPG7 69 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 SH3PXD2BA1X283 911 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 PIPSLA2A3N6 862 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 CDK2AP1O14519 115 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 RASGRP1O95267 797 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 DDX5P17844 614 aaKnown RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 DRD1P21728 446 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 CFL1P23528 166 aaKnown RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 PTGER1P34995 402 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 VHLP40337 213 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 CBX5P45973 191 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 AQP4P55087 323 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 RAE1P78406 368 aaKnown RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 SLC14A1Q13336 389 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 GAS6Q14393 721 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 KRT33BQ14525 404 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 MAPKAPK3Q16644 382 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 CDONQ4KMG0 1287 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 PYCR3Q53H96 274 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 CDKL4Q5MAI5 379 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 SAMD4BQ5PRF9 694 aaKnown RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 PRAMEF14Q5SWL7 426 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 PRAMEF13Q5VWM6 474 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 GRHL2Q6ISB3 625 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ZNF761Q86XN6 746 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 SYT12Q8IV01 421 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 MSRB3Q8IXL7 192 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ST13P4Q8IZP2 240 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 CLECL1Q8IZS7 167 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 GALNT4Q8N4A0 578 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 OR10A6Q8NH74 314 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 CANT1Q8WVQ1 401 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 SLC13A3Q8WWT9 602 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 LRTOMTQ8WZ04 291 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 GTF2H4Q92759 462 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ROPN1LQ96C74 230 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ASB9Q96DX5 294 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ZNF514Q96K75 400 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 BMFQ96LC9 184 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 LINC00615Q96LM1 132 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 GAS2L1Q99501 681 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 KCTD14Q9BQ13 255 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 THUMPD3Q9BV44 507 aaKnown RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 BTBD1Q9H0C5 482 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 KLHL25Q9H0H3 589 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ALG2Q9H553 416 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 SCPEP1Q9HB40 452 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 C8orf4Q9NR00 106 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 SPHK1Q9NYA1 384 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 EMC3Q9P0I2 261 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 C5AR2Q9P296 337 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 VPS29Q9UBQ0 182 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 TBC1D29Q9UFV1 150 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 LEF1Q9UJU2 399 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ANGPTL2Q9UKU9 493 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 DYRK1BQ9Y463 629 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 DGKBQ9Y6T7 804 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 TTC28Q96AY4 2481 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 C17orf113A0A1B0GUU1 675 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 A0A1W2PRQ8 180 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 PRSS38A1L453 326 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 SNTNA6NMZ2 147 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 WASHC1A8K0Z3 465 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 BBIP1A8MTZ0 92 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 CACNB4O00305 520 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ARPC2O15144 300 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 CPSF4O95639 269 aaKnown RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 KRT75O95678 551 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 CRYZL1O95825 349 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ABCB1P08183 1280 aaPredicted RBP4.88□□□□□ -1.63
ATXN3-202ENST00000359366 LAMP1P11279 417 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ZNF12P17014 697 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 JAK1P23458 1154 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 MAOBP27338 520 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 NAA20P61599 178 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ACSM2AQ08AH3 577 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 UBXN2BQ14CS0 331 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 GGTA1PQ4G0N0 100 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 C6orf183Q5T699 404 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 FOXB2Q5VYV0 432 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 LIPJQ5W064 366 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 ACSM2BQ68CK6 577 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 WASH2PQ6VEQ5 465 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 B3GNT6Q6ZMB0 384 aa4.88□□□□□ -1.63
ATXN3-202ENST00000359366 GCNT7Q6ZNI0 430 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms