RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 A0A0J9YY10 115 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 A0A1B0GTQ1 180 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 OR5K3A6NET4 321 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 ARHGAP33O14559 1287 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 HAT1O14929 419 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 PCDH7O60245 1069 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 SH3BGRLO75368 114 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 EEDO75530 441 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 ALPPL2P10696 532 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 EPHA8P29322 1005 aaPredicted RBP13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 IL12AP29459 219 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 ZFP36L2P47974 494 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 CCT8P50990 548 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 RAP1GDS1P52306 607 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 RPS15AP62244 130 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 BNC1Q01954 994 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 HLA-BQ31612 363 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 VPS26BQ4G0F5 336 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 TIGD2Q4W5G0 525 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 KHDRBS2Q5VWX1 349 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 OGFOD3Q6PK18 319 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 SPESP1Q6UW49 350 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 PAQR7Q86WK9 346 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 C17orf82Q86X59 251 aaPredicted RBP13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 ZNF761Q86XN6 746 aaPredicted RBP13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 FAM20CQ8IXL6 584 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 ANKRD53Q8N9V6 530 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 MFSD9Q8NBP5 474 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 TRPV3Q8NET8 790 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 CLHC1Q8NHS4 586 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 UTP4Q969X6 686 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 ROPN1LQ96C74 230 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 C11orf24Q96F05 449 aaPredicted RBP13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 SLC45A3Q96JT2 553 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 THTPAQ9BU02 230 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 DUSP23Q9BVJ7 150 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 SARGQ9BW04 601 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 CLMPQ9H6B4 373 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 GID8Q9NWU2 228 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 HRASLS2Q9NWW9 162 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 UCKL1Q9NWZ5 548 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 PCDHGA4Q9Y5G9 962 aa13.24□□□□□ -0.29
PDLIM5-203ENST00000359265 OR2A25A4D2G3 310 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 NDUFS4O43181 175 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 TNFSF14O43557 240 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 FOXD2O60548 495 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 CIB2O75838 187 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 IL6P05231 212 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 ANXA4P09525 319 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 PRPS1L1P21108 318 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 BCL6P41182 706 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 GRIA3P42263 894 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 C21orf58P58505 322 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 RAE1P78406 368 aaKnown RBP13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 ZNF763Q0D2J5 394 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 DPY19L1Q2PZI1 675 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 TMEM35AQ53FP2 167 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 C6orf132Q5T0Z8 1188 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 DEPDC1Q5TB30 811 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 GALNT18Q6P9A2 607 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 BNC2Q6ZN30 1099 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 PAGE2Q7Z2X7 111 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 COMMD6Q7Z4G1 85 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 TRIM73Q86UV7 250 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 PLD3Q8IV08 490 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 SCUBE1Q8IWY4 988 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 TESCQ96BS2 214 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 QRFPRQ96P65 431 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 SLC38A3Q99624 504 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 ARRDC1-AS1Q9H2J1 176 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 SMOC1Q9H4F8 434 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 GAREM1Q9H706 876 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 SLC52A3Q9NQ40 469 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 BAIAP2L1Q9UHR4 511 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 MCM8Q9UJA3 840 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 AP1M2Q9Y6Q5 423 aa13.23□□□□□ -0.29
PDLIM5-203ENST00000359265 UNC79Q9P2D8 2635 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 GNG14A0A1W2PPG7 69 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 KHNYNO15037 678 aaKnown RBP13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 PPM1DO15297 605 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 LCMT2O60294 686 aaKnown RBP13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 UBXN7O94888 489 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 SERPIND1P05546 499 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 ZNF806P0C7X5 589 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 MAGP20916 626 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 TACR1P25103 407 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 HPCAL1P37235 193 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 NOVA1P51513 510 aaKnown RBP13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 ATXN3P54252 364 aaPredicted RBP13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 EPHA4P54764 986 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 PSME3P61289 254 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 FOXM1Q08050 763 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 NFYCQ13952 458 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 FAM174BQ3ZCQ3 159 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 C6orf163Q5TEZ5 329 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 PRMT9Q6P2P2 845 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 FIGLAQ6QHK4 219 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 RETREG3Q86VR2 466 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 ULK2Q8IYT8 1036 aa13.22□□□□□ -0.29
PDLIM5-203ENST00000359265 KRTCAP2Q8N6L1 136 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms