RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 HYKKA2RU49 373 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 GOLGA8OA6NCC3 632 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 B4E171 279 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 GOLGA8NF8WBI6 632 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 PLD2O14939 933 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 POLR1CO15160 346 aaPredicted RBP24.15■■□□□ 1.46
SSBP3-202ENST00000357475 ZSCAN9O15535 394 aaPredicted RBP24.15■■□□□ 1.46
SSBP3-202ENST00000357475 ZNF749O43361 778 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 FGF5P12034 268 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 DRD4P21917 467 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 TSPAN7P41732 249 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 GCGRP47871 477 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 TBL3Q12788 808 aaKnown RBP24.15■■□□□ 1.46
SSBP3-202ENST00000357475 CACTIN-AS1Q8N1I8 211 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 AFAP1L2Q8N4X5 818 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 AMER3Q8N944 861 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 UTP15Q8TED0 518 aaKnown RBP24.15■■□□□ 1.46
SSBP3-202ENST00000357475 APIPQ96GX9 242 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 ZNF717Q9BY31 904 aaPredicted RBP24.15■■□□□ 1.46
SSBP3-202ENST00000357475 FAM107BQ9H098 131 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 MEAF6Q9HAF1 191 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 ENAMQ9NRM1 1142 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 VTI1BQ9UEU0 232 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 DCTN4Q9UJW0 460 aa24.15■■□□□ 1.46
SSBP3-202ENST00000357475 SPTBN2O15020 2390 aa24.14■■□□□ 1.46
SSBP3-202ENST00000357475 GMNCA6NCL1 334 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 PLPP1O14494 284 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 ERI3O43414 337 aaKnown RBP24.14■■□□□ 1.45
SSBP3-202ENST00000357475 SHOX2O60902 331 aaPredicted RBP24.14■■□□□ 1.45
SSBP3-202ENST00000357475 ALOX15P16050 662 aaPredicted RBP24.14■■□□□ 1.45
SSBP3-202ENST00000357475 ZNF28P17035 718 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 PTX3P26022 381 aaPredicted RBP24.14■■□□□ 1.45
SSBP3-202ENST00000357475 PLA2G16P53816 162 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 AQP5P55064 265 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 IMPG1Q17R60 797 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 C10orf62Q5T681 223 aaPredicted RBP24.14■■□□□ 1.45
SSBP3-202ENST00000357475 PPP1R3BQ86XI6 285 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 SERPINI1Q99574 410 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 C17orf62Q9BQA9 187 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 EBF4Q9BQW3 602 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 KCNK13Q9HB14 408 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 DHCR7Q9UBM7 475 aaKnown RBP24.14■■□□□ 1.45
SSBP3-202ENST00000357475 VPS29Q9UBQ0 182 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 PPT2Q9UMR5 302 aa24.14■■□□□ 1.45
SSBP3-202ENST00000357475 SLCO1B7G3V0H7 640 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 SLC28A1O00337 649 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 LSM1O15116 133 aaKnown RBP24.13■■□□□ 1.45
SSBP3-202ENST00000357475 JMJD7P0C870 316 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 SMIM10L1P0DMW3 83 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 HSD3B1P14060 373 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 HSD3B2P26439 372 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 EPHA3P29320 983 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 HK2P52789 917 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 ZNF33BQ06732 778 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 CUL3Q13618 768 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 IL11RAQ14626 422 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 PUM1Q14671 1186 aaKnown RBP eCLIP24.13■■□□□ 1.45
SSBP3-202ENST00000357475 GRM7Q14831 915 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 PDSS2Q86YH6 399 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 GPR135Q8IZ08 494 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 KIRREL3Q8IZU9 778 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 GALNT15Q8N3T1 639 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 METTL27Q8N6F8 245 aaPredicted RBP24.13■■□□□ 1.45
SSBP3-202ENST00000357475 GBP7Q8N8V2 638 aaPredicted RBP24.13■■□□□ 1.45
SSBP3-202ENST00000357475 SLC38A9Q8NBW4 561 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 WDR36Q8NI36 951 aaKnown RBP24.13■■□□□ 1.45
SSBP3-202ENST00000357475 SMIM10Q96HG1 83 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 PSD3Q9NYI0 1048 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 B3GALT1Q9Y5Z6 326 aa24.13■■□□□ 1.45
SSBP3-202ENST00000357475 DNAJB6O75190 326 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 PEX11AO75192 247 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 TGDSO95455 350 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 IL1RNP18510 177 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 IDH3AP50213 366 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 STXBP1P61764 594 aaKnown RBP24.12■■□□□ 1.45
SSBP3-202ENST00000357475 NR6A1Q15406 480 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 SPDYAQ5MJ70 313 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 TLDC1Q6P9B6 456 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 ABHD17CQ6PCB6 329 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 EPGNQ6UW88 154 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 ZNF793Q6ZN11 406 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 CHSY3Q70JA7 882 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 OR2L5Q8NG80 312 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 TEFMQ96QE5 360 aaKnown RBP24.12■■□□□ 1.45
SSBP3-202ENST00000357475 OR52B2Q96RD2 323 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 NLNQ9BYT8 704 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 AKTIPQ9H8T0 292 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 CUTCQ9NTM9 273 aa24.12■■□□□ 1.45
SSBP3-202ENST00000357475 RGS14O43566 566 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 DIAPH2O60879 1101 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 SCRG1O75711 98 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 GBAP04062 536 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 NTRK1P04629 796 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 ATXN8OSP0DMR3 200 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 FOXC1Q12948 553 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 EIF3IQ13347 325 aaKnown RBP24.11■■□□□ 1.45
SSBP3-202ENST00000357475 GALNTL6Q49A17 601 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 MANEAQ5SRI9 462 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 RIPOR1Q6ZS17 1223 aa24.11■■□□□ 1.45
SSBP3-202ENST00000357475 TMEM126BQ8IUX1 230 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms