RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 HOXD8P13378 290 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 HOXD9P28356 352 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 CTGFP29279 349 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 CD70P32970 193 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 CTSOP43234 321 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 CCR4P51679 360 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 RAPSNQ13702 412 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 EFR3AQ14156 821 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 ADGRD2Q7Z7M1 963 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 PGBD3Q8N328 593 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 CD200R1Q8TD46 325 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 SNAPC3Q92966 411 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 EGLN2Q96KS0 407 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 ATOH8Q96SQ7 321 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 THUMPD1Q9NXG2 353 aaKnown RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 CLIC1O00299 241 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 ADAMDEC1O15204 470 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 ADH1AP07327 375 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 HLA-EP13747 358 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 BMP7P18075 431 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 MYF6P23409 242 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 SSTR4P31391 388 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 POLR2IP36954 125 aaKnown RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 LMAN2Q12907 356 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 EIF2B5Q13144 721 aaKnown RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 HNRNPA0Q13151 305 aaKnown RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 FAM92BQ6ZTR7 304 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 TMEM126BQ8IUX1 230 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 OR4K1Q8NGD4 311 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 FCGR1BQ92637 280 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 TRIM43Q96BQ3 446 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 PPCDCQ96CD2 204 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 TMED9Q9BVK6 235 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 NUSAP1Q9BXS6 441 aaKnown RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 IL26Q9NPH9 171 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 FAM118AQ9NWS6 357 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 THG1LQ9NWX6 298 aaKnown RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 A0A075B6Q4 140 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 FXYD6-FXYD2A0A087WZ82 144 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 LOC285095A0A1B0GVY8 99 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 INMT-MINDY4F8WBC2 141 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 NAT2P11245 290 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 CYP2A6P11509 494 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 ANXA11P50995 505 aaKnown RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 MANFP55145 182 aaKnown RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 TARDBPQ13148 414 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■■□ 20.5
SREBF1-202ENST00000355815 DUS1LQ6P1R4 473 aaKnown RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 TBC1D15Q8TC07 691 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 JPH3Q8WXH2 748 aaPredicted RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 TFAP2CQ92754 450 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 CLP1Q92989 425 aaKnown RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 CCDC115Q96NT0 180 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 FXYD6Q9H0Q3 95 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 OR51V1Q9H2C8 321 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 CREBZFQ9NS37 354 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 AIG1Q9NVV5 245 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 IL37Q9NZH6 218 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 PHF11Q9UIL8 331 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 SPAG17Q6Q759 2223 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 H3BSH0 61 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 FKTNO75072 461 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 RING1Q06587 406 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 C2orf80Q0P641 193 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 Q6ZNX1 250 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 CNTN4Q8IWV2 1026 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 UCK2Q9BZX2 261 aa13.59□□□□□ -0.23
SREBF1-202ENST00000355815 POLR2J3Q9H1A7 115 aaKnown RBP13.59□□□□□ -0.23
SREBF1-202ENST00000355815 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-202ENST00000355815 KIAA0513O60268 411 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 UGT2B17O75795 530 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 IFNA7P01567 189 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 SLC10A3P09131 477 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 IL7P13232 177 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 GADD45AP24522 165 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 MAPK8P45983 427 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 MCCD1P59942 119 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-202ENST00000355815 DCST1Q5T197 706 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 GPRC6AQ5T6X5 926 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 IER5LQ5T953 404 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 GARNL3Q5VVW2 1013 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 COQ8AQ8NI60 647 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 RHEBL1Q8TAI7 183 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 PMEPA1Q969W9 287 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 ACDQ96AP0 544 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 VMP1Q96GC9 406 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 RSPH9Q9H1X1 276 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-202ENST00000355815 OR2AG1Q9H205 316 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 TUBB1Q9H4B7 451 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 ARNT2Q9HBZ2 717 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 VAPAQ9P0L0 249 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 INSL5Q9Y5Q6 135 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 PRSS21Q9Y6M0 314 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 COL11A1P12107 1806 aaPredicted RBP13.58□□□□□ -0.24
SREBF1-202ENST00000355815 POP4O95707 220 aaKnown RBP13.58□□□□□ -0.24
SREBF1-202ENST00000355815 BPIP17213 487 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 ENGP17813 658 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 BDKRB1P46663 353 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 HMGN2P46Q86SG4 172 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 MARCH9Q86YJ5 346 aa13.58□□□□□ -0.24
SREBF1-202ENST00000355815 PIAS4Q8N2W9 510 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms