RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 TREX2Q9BQ50 279 aaPredicted RBP4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 FDXACB1Q9BRP7 624 aaPredicted RBP4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 MENTQ9BUN1 341 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 HDHD5Q9BXW7 423 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 ZDHHC5Q9C0B5 715 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 SLIRPQ9GZT3 109 aaKnown RBP4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 NXF2Q9GZY0 626 aaKnown RBP4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 OPN3Q9H1Y3 402 aaPredicted RBP4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 MTIF3Q9H2K0 278 aaKnown RBP4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 MUC13Q9H3R2 512 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 ESRP2Q9H6T0 727 aaKnown RBP4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 KAT8Q9H7Z6 458 aaKnown RBP4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 RPF1Q9H9Y2 349 aaKnown RBP4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 TCF7L1Q9HCS4 588 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 ASCL3Q9NQ33 180 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 ENTPD7Q9NQZ7 604 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 DYRK4Q9NR20 520 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 EVA1BQ9NVM1 165 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 USE1Q9NZ43 259 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 SIRPGQ9P1W8 387 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 TMEM181Q9P2C4 612 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 SARDHQ9UL12 918 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 CA14Q9ULX7 337 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 CA5BQ9Y2D0 317 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 PLEKHA6Q9Y2H5 1048 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 FCF1Q9Y324 198 aaKnown RBP4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 EVPLQ92817 2033 aa4.69□□□□□ -1.66
HMBOX1-202ENST00000355231 PRRC2BQ5JSZ5 2229 aaKnown RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 TEX13CA0A0J9YWL9 993 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 A0A1B0GTW7 788 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 ABHD14A-ACY1A0A1B0GW23 586 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 A0A1W2PPL8 197 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 TCRBV3S1A0A5B6 114 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 BCLAF3A2AJT9 711 aaKnown RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 LINC01553A4QN01 128 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 RRN3P2A6NIE6 340 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 AQP12BA6NM10 295 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 TRIM49D1C9J1S8 452 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 TNFRSF10BO14763 440 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 HSPA12AO43301 675 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 PRKYO43930 277 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 SNNO75324 88 aaPredicted RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 CILPO75339 1184 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 EIF3GO75821 320 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 RECKO95980 971 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 APRTP07741 180 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 GALTP07902 379 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 ANXA5P08758 320 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 LINC00271P0C7V0 271 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 CCNYL3P0C7X3 344 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 CBSLP0DN79 551 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 ERVK-10P10266 1014 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 PKMP14618 531 aaKnown RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 SPNP16150 400 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 CBR1P16152 277 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 RAB3BP20337 219 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 BGNP21810 368 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 ATP5A1P25705 553 aaKnown RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 CCR7P32248 378 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 PCGF2P35227 344 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 CBSP35520 551 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 GRM5P41594 1212 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 GRIA1P42261 906 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 GPR3P46089 330 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 KPNA2P52292 529 aaKnown RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 NRLP54845 237 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 PKNOX1P55347 436 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 MAZP56270 477 aaKnown RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 RAB2AP61019 212 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 TFAMQ00059 246 aaKnown RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 OGDHQ02218 1023 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 GAGE1Q13065 139 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 PDIA2Q13087 525 aaKnown RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 CBLBQ13191 982 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 IL18R1Q13478 541 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 BMPR2Q13873 1038 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 GRB7Q14451 532 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 DHCR24Q15392 516 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 ZNHIT3Q15649 155 aaPredicted RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 GPR68Q15743 365 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 RFX4Q33E94 735 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 SLC10A6Q3KNW5 377 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 PTPN20Q4JDL3 420 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 ZNF667Q5HYK9 610 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 OR2B11Q5JQS5 317 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 SLC35F1Q5T1Q4 408 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 AVPI1Q5T686 147 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 MLIPQ5VWP3 458 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 SEL1L3Q68CR1 1132 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 XAF1Q6GPH4 301 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 JADE1Q6IE81 842 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 RAB12Q6IQ22 244 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 PTCRAQ6ISU1 281 aaPredicted RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 CNKSR3Q6P9H4 555 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 DARS2Q6PI48 645 aaKnown RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 ZC3H14Q6PJT7 736 aaKnown RBP4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 KLHL24Q6TFL4 600 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 C1orf122Q6ZSJ8 110 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 SHFQ7M4L6 423 aa4.68□□□□□ -1.66
HMBOX1-202ENST00000355231 NLRC3Q7RTR2 1065 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms