RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CSNK1A1LQ8N752 337 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 AVL9Q8NBF6 648 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 ISG20Q96AZ6 181 aaKnown RBP13.21□□□□□ -0.3
SMC6-201ENST00000351948 TAPBPLQ9BX59 468 aa13.21□□□□□ -0.3
SMC6-201ENST00000351948 JUPP14923 745 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 ZXDBP98169 803 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 RBM44Q6ZP01 1051 aaKnown RBP13.2□□□□□ -0.3
SMC6-201ENST00000351948 THAP5Q7Z6K1 395 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 C19orf18Q8NEA5 215 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 ASB9Q96DX5 294 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 S100A13Q99584 98 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 IFT27Q9BW83 186 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 REEP4Q9H6H4 257 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 PDE7BQ9NP56 450 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 IFT80Q9P2H3 777 aaPredicted RBP13.2□□□□□ -0.3
SMC6-201ENST00000351948 HCN2Q9UL51 889 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 GSTK1Q9Y2Q3 226 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 FAM221BA6H8Z2 402 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 OR2B3O76000 313 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 RANBP1P43487 201 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 NRG3P56975 720 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 EEFSECP57772 596 aaKnown RBP13.2□□□□□ -0.3
SMC6-201ENST00000351948 LGALS3BPQ08380 585 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 PDZK1Q5T2W1 519 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 LETMD1Q6P1Q0 360 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 NXPE3Q969Y0 559 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 ADAMTS6Q9UKP5 1117 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 TRIOBPQ9H2D6 2365 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 PSMD11O00231 422 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 C9P02748 559 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 CXCL10P02778 98 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 ARMC4Q5T2S8 1044 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 SLC29A4Q7RTT9 530 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 DPH2Q9BQC3 489 aaPredicted RBP13.2□□□□□ -0.3
SMC6-201ENST00000351948 CPEB1Q9BZB8 566 aaKnown RBP13.2□□□□□ -0.3
SMC6-201ENST00000351948 NPC1O15118 1278 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 MATN1P21941 496 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 PTGER1P34995 402 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 ARMCX4Q5H9R4 360 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 PLA2G15Q8NCC3 412 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 PHOSPHO1Q8TCT1 267 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 C1GALT1C1Q96EU7 318 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 POLR2J3Q9H1A7 115 aaKnown RBP13.2□□□□□ -0.3
SMC6-201ENST00000351948 STARD5Q9NSY2 213 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 FAM120CQ9NX05 1096 aaKnown RBP13.2□□□□□ -0.3
SMC6-201ENST00000351948 CLEC4AQ9UMR7 237 aa13.2□□□□□ -0.3
SMC6-201ENST00000351948 SLC16A5O15375 505 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 UGT2B11O75310 529 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 OR5F1O95221 314 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 TIA1P31483 386 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMC6-201ENST00000351948 RABIFP47224 123 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 SRP54P61011 504 aaKnown RBP13.19□□□□□ -0.3
SMC6-201ENST00000351948 IZUMO1Q8IYV9 350 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 OR4K14Q8NGD5 310 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 ARRDC3Q96B67 414 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 RHBDL2Q9NX52 303 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 COL11A2P13942 1736 aaPredicted RBP13.19□□□□□ -0.3
SMC6-201ENST00000351948 LINC01565O15544 149 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 MFN2O95140 757 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 FHP07954 510 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 C1SP09871 688 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 ENPP2Q13822 863 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 SPANXN2Q5MJ10 180 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 NANOGP8Q6NSW7 305 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 PNCKQ6P2M8 343 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 ZNF534Q76KX8 674 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 IL4I1Q96RQ9 567 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 GPATCH1Q9BRR8 931 aaKnown RBP13.19□□□□□ -0.3
SMC6-201ENST00000351948 NANOGQ9H9S0 305 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 Q9N2J8 555 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 PRSS16Q9NQE7 514 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 KLRF1Q9NZS2 232 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 DUX1O43812 170 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 JAK1P23458 1154 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 SUOXP51687 545 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 NEK5Q6P3R8 708 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 MYEOVQ96EZ4 313 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 TBX5Q99593 518 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 SLC12A9Q9BXP2 914 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 ELOA3DA6NLF2 546 aaPredicted RBP13.19□□□□□ -0.3
SMC6-201ENST00000351948 OR5K4A6NMS3 321 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 RIIAD1A6NNX1 92 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 ARHGEF33A8MVX0 844 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 CREG1O75629 220 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 CH25HO95992 272 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 GIMD1P0DJR0 217 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 PCYT1AP49585 367 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 NR1H2P55055 460 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 DGUOKQ16854 277 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 ELOA3BQ3SY89 546 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 LGI4Q8N135 537 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 RNF175Q8N4F7 328 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 ELOA3Q8NG57 546 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 ZHX1-C8orf76Q96EF9 292 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 HSH2DQ96JZ2 352 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 CAMK1GQ96NX5 476 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 KCNC2Q96PR1 638 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 DNAJB9Q9UBS3 223 aa13.19□□□□□ -0.3
SMC6-201ENST00000351948 RREB1Q92766 1687 aa13.18□□□□□ -0.3
SMC6-201ENST00000351948 RSL1D1O76021 490 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms