RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TTC9BQ8N6N2 239 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 ZNF676Q8N7Q3 588 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 OR2L5Q8NG80 312 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 TSSK6Q9BXA6 273 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 PTBP2Q9UKA9 531 aaKnown RBP15.47■□□□□ 0.07
PTPN11-201ENST00000351677 RNF6Q9Y252 685 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 SLC35F4A4IF30 521 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 J3QLW9 94 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 AKAP8O43823 692 aaKnown RBP15.47■□□□□ 0.07
PTPN11-201ENST00000351677 CD2P06729 351 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 HOXB2P14652 356 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 ZNF19P17023 458 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 MLLT10P55197 1068 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 DCDC1P59894 354 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 SH3BP2P78314 561 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 LIPJQ5W064 366 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 REEP3Q6NUK4 255 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 B3GNT9Q6UX72 402 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 RASSF6Q6ZTQ3 369 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 TMEM126BQ8IUX1 230 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 TCEANCQ8N8B7 351 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 SPHK2Q9NRA0 654 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 CCDC59Q9P031 241 aaKnown RBP15.47■□□□□ 0.07
PTPN11-201ENST00000351677 HCN4Q9Y3Q4 1203 aa15.47■□□□□ 0.07
PTPN11-201ENST00000351677 PITPNAQ00169 270 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 MLLT1Q03111 559 aaPredicted RBP15.46■□□□□ 0.07
PTPN11-201ENST00000351677 FCHO2Q0JRZ9 810 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 SLC22A16Q86VW1 577 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 OR56A1Q8NGH5 318 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 TSPEARQ8WU66 669 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 CNDP2Q96KP4 475 aaKnown RBP15.46■□□□□ 0.07
PTPN11-201ENST00000351677 SLC22A4Q9H015 551 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 BRD7Q9NPI1 651 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 IFT46Q9NQC8 304 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 MRPS17Q9Y2R5 130 aaKnown RBP15.46■□□□□ 0.07
PTPN11-201ENST00000351677 ZCWPW2A0A1B0GU75 182 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 CNMDO75829 334 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 CXCR1P25024 350 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 ACSL1P33121 698 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 LRRTM3Q86VH5 581 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 ZFAND4Q86XD8 727 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 APCDD1Q8J025 514 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 NCSTNQ92542 709 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 GLYATL1Q969I3 302 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 RTP4Q96DX8 246 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 RGS17Q9UGC6 210 aaPredicted RBP15.46■□□□□ 0.07
PTPN11-201ENST00000351677 DNAJC15Q9Y5T4 150 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 A0A096LPI6 279 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 H3BSH0 61 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 ZNF182P17025 639 aaPredicted RBP15.46■□□□□ 0.07
PTPN11-201ENST00000351677 CDH11P55287 796 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 SORCS1Q8WY21 1168 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 ARFGAP1Q8N6T3 406 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 ISOC1Q96CN7 298 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 MS4A12Q9NXJ0 267 aa15.46■□□□□ 0.07
PTPN11-201ENST00000351677 AREL1O15033 823 aa15.46■□□□□ 0.06
PTPN11-201ENST00000351677 KHNYNO15037 678 aaKnown RBP15.46■□□□□ 0.06
PTPN11-201ENST00000351677 RHOP08100 348 aa15.46■□□□□ 0.06
PTPN11-201ENST00000351677 ADGRD2Q7Z7M1 963 aa15.46■□□□□ 0.06
PTPN11-201ENST00000351677 CHERPQ8IWX8 916 aaKnown RBP15.46■□□□□ 0.06
PTPN11-201ENST00000351677 SYT11Q9BT88 431 aa15.46■□□□□ 0.06
PTPN11-201ENST00000351677 BTBD1Q9H0C5 482 aa15.46■□□□□ 0.06
PTPN11-201ENST00000351677 GRIP1Q9Y3R0 1128 aa15.46■□□□□ 0.06
PTPN11-201ENST00000351677 LAMB4A4D0S4 1761 aa15.46■□□□□ 0.06
PTPN11-201ENST00000351677 CAPN5O15484 640 aaPredicted RBP15.45■□□□□ 0.06
PTPN11-201ENST00000351677 HTR1EP28566 365 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 OR4D2P58180 307 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 TSPAN5P62079 268 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 ATG9BQ674R7 924 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 KXD1Q9BQD3 176 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 EEDO75530 441 aaKnown RBP15.45■□□□□ 0.06
PTPN11-201ENST00000351677 RASAL1O95294 804 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 TYRP1P17643 537 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 SLC6A4P31645 630 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 MAP2K4P45985 399 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 GSCP56915 257 aaPredicted RBP15.45■□□□□ 0.06
PTPN11-201ENST00000351677 HMGN2P46Q86SG4 172 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 ZNF527Q8NB42 609 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 STOML2Q9UJZ1 356 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 A8MU76 341 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 G3V2L1 256 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 RCBTB2O95199 551 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 PAK4O96013 591 aaPredicted RBP15.45■□□□□ 0.06
PTPN11-201ENST00000351677 WSCD2Q2TBF2 565 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 BLOC1S3Q6QNY0 202 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 OR2AJ1Q8NGZ0 328 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 TMEM80Q96HE8 168 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 FAM210AQ96ND0 272 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 DPH2Q9BQC3 489 aaPredicted RBP15.45■□□□□ 0.06
PTPN11-201ENST00000351677 PFDN2Q9UHV9 154 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 SLCO3A1Q9UIG8 710 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 ERVK-11Q9UQG0 969 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 ZNF451Q9Y4E5 1061 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 OR12D2P58182 307 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 RAB39AQ14964 217 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 ZNF789Q5FWF6 425 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 CCDC116Q8IYX3 515 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 ADAD1Q96M93 576 aaKnown RBP15.45■□□□□ 0.06
PTPN11-201ENST00000351677 PCDHB3Q9Y5E6 796 aa15.45■□□□□ 0.06
PTPN11-201ENST00000351677 COL2A1P02458 1487 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms