RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 EIF1P41567 113 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 POU4F2Q12837 409 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 H3F3CQ6NXT2 135 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 MAMDC2Q7Z304 686 aaPredicted RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 NLRP8Q86W28 1048 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 BET1LQ9NYM9 111 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 SLC17A6Q9P2U8 582 aa3.66□□□□□ -1.82
SYNE2-202ENST00000344113 METTL1Q9UBP6 276 aaKnown RBP3.66□□□□□ -1.82
SYNE2-202ENST00000344113 LSM8O95777 96 aaKnown RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 KCNJ5P48544 419 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 GTF2BQ00403 316 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 NRF1Q16656 503 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 MICBQ29980 383 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 LPCAT3Q6P1A2 487 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 GALNTL5Q7Z4T8 443 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 GPX8Q8TED1 209 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 SLC20A1Q8WUM9 679 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 MITD1Q8WV92 249 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 WDFY2Q96P53 400 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 DDIT4Q9NX09 232 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF586Q9NXT0 402 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 NUDT4Q9NZJ9 180 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 VAPAQ9P0L0 249 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 SLC7A11Q9UPY5 501 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 ABCA8O94911 1581 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 NRKQ7Z2Y5 1582 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 OR10J4P0C629 311 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF26P17031 533 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 ALDH7A1P49419 539 aaKnown RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 MED22Q15528 200 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 KIAA1161Q6NSJ0 714 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 TRIM40Q6P9F5 258 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 ISG20Q96AZ6 181 aaKnown RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 RRAGCQ9HB90 399 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 TUBG2Q9NRH3 451 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 HCN2Q9UL51 889 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 PPP1R3CQ9UQK1 317 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 BSGP35613 385 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 PTGER2P43116 358 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 EIF4EBP2Q13542 120 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 TMCO2Q7Z6W1 182 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 DSELQ8IZU8 1212 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 HAS1Q92839 578 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 TSPOAP1O95153 1857 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 CACNA1EQ15878 2313 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 WNK2Q9Y3S1 2297 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 A0A0U1RQJ8 604 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 BNIP3LO60238 219 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 ERN1O75460 977 aaKnown RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 CYP11A1P05108 521 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 CYP2A7P20853 494 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 CLCN4P51793 760 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 AAK1Q2M2I8 961 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 CES4AQ5XG92 561 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 CD101Q93033 1021 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 UTP4Q969X6 686 aaKnown RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 VAT1Q99536 393 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 C14orf93Q9H972 538 aaKnown RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 UBE2TQ9NPD8 197 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 FSCN2O14926 492 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 ALPPL2P10696 532 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 TRHRP34981 398 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 AQP4P55087 323 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF273Q14593 569 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 MLIPQ5VWP3 458 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 ZER1Q7Z7L7 766 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 TNFRSF14Q92956 283 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 HMCESQ96FZ2 354 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 BSCL2Q96G97 398 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 CDHR5Q9HBB8 845 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 IL17RBQ9NRM6 502 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 MAN2C1Q9NTJ4 1040 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 NLKQ9UBE8 527 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 VWA7Q9Y334 891 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 FBP1P09467 338 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 TUBP50607 506 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 C3orf38Q5JPI3 329 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 VN1R5Q7Z5H4 357 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 CMTR1Q8N1G2 835 aaKnown RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 FAM89AQ96GI7 184 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 PIWIL1Q96J94 861 aaKnown RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 PCCAP05165 728 aaPredicted RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 CAPN3P20807 821 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 CBFBQ13951 182 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 DPY19L1Q2PZI1 675 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 EXOSC6Q5RKV6 272 aaKnown RBP3.65□□□□□ -1.82
SYNE2-202ENST00000344113 FBXO33Q7Z6M2 555 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 LAS2Q8IYD9 372 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 CERKQ8TCT0 537 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 SLC5A11Q8WWX8 675 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 SMPDL3AQ92484 453 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 MACROD1Q9BQ69 325 aa3.65□□□□□ -1.82
SYNE2-202ENST00000344113 ATG12O94817 140 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 MAGP20916 626 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 GLP1RP43220 463 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 AFF3P51826 1226 aaKnown RBP3.65□□□□□ -1.83
SYNE2-202ENST00000344113 LBX1P52954 281 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 FAM153CQ494X1 144 aa3.65□□□□□ -1.83
SYNE2-202ENST00000344113 ZNF549Q6P9A3 640 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms