RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.87■□□□□ 0.45
SMPD1-201ENST00000342245 PPP1R3EQ9H7J1 279 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 SLC28A3Q9HAS3 691 aa17.87■□□□□ 0.45
SMPD1-201ENST00000342245 EIF2B4Q9UI10 523 aaKnown RBP17.87■□□□□ 0.45
SMPD1-201ENST00000342245 CCNB2O95067 398 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 ALDH1A1P00352 501 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 ACSM4P0C7M7 580 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 ITGALP20701 1170 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 DUSP6Q16828 381 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 RNLSQ5VYX0 342 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 CD276Q5ZPR3 534 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 ZNF600Q6ZNG1 722 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 Q6ZPB1 254 aaPredicted RBP17.86■□□□□ 0.45
SMPD1-201ENST00000342245 TRILQ7L0X0 811 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 GPSM1Q86YR5 675 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 TKTL2Q9H0I9 626 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 CRISPLD1Q9H336 500 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 ZNF112Q9UJU3 913 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 LIPT1Q9Y234 373 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 LSM2Q9Y333 95 aaKnown RBP17.86■□□□□ 0.45
SMPD1-201ENST00000342245 ZBTB42B2RXF5 422 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 BTN3A1O00481 513 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 FGF10O15520 208 aaPredicted RBP17.86■□□□□ 0.45
SMPD1-201ENST00000342245 SULT1B1O43704 296 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 GMDSO60547 372 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 PLOD3O60568 738 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 HTR6P50406 440 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 EPHA5P54756 1037 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 NRG1Q02297 640 aaPredicted RBP17.86■□□□□ 0.45
SMPD1-201ENST00000342245 MLLT11Q13015 90 aaPredicted RBP17.86■□□□□ 0.45
SMPD1-201ENST00000342245 ZNF169Q14929 603 aaPredicted RBP17.86■□□□□ 0.45
SMPD1-201ENST00000342245 SPHARQ15513 63 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 VMACQ2NL98 169 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 MSANTD1Q6ZTZ1 278 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 LIX1Q8N485 282 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 MYLPFQ96A32 169 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 RBP7Q96R05 134 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 WACQ9BTA9 647 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 CD274Q9NZQ7 290 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 KCNMB2Q9Y691 235 aa17.86■□□□□ 0.45
SMPD1-201ENST00000342245 HAS3O00219 553 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 CDC7O00311 574 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 FGF18O76093 207 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 OR5F1O95221 314 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 OTCP00480 354 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 IQCF3P0C7M6 154 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 HOXB9P17482 250 aaPredicted RBP17.85■□□□□ 0.45
SMPD1-201ENST00000342245 C1DQ13901 141 aaKnown RBP17.85■□□□□ 0.45
SMPD1-201ENST00000342245 FCN2Q15485 313 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 AMHR2Q16671 573 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 ASPGQ86U10 573 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 DCBLD1Q8N8Z6 715 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 TMEM145Q8NBT3 493 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 OR52B6Q8NGF0 335 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.85■□□□□ 0.45
SMPD1-201ENST00000342245 NUDT8Q8WV74 236 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 SLC9A6Q92581 669 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 NXPE2Q96DL1 559 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 ATG4CQ96DT6 458 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 WBP1Q96G27 269 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 ZNF419Q96HQ0 510 aaPredicted RBP17.85■□□□□ 0.45
SMPD1-201ENST00000342245 FEVQ99581 238 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 PRR14Q9BWN1 585 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 CATSPERZQ9NTU4 200 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 OSER1Q9NX31 292 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 TAS2R16Q9NYV7 291 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 PADI2Q9Y2J8 665 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 CCL27Q9Y4X3 112 aa17.85■□□□□ 0.45
SMPD1-201ENST00000342245 NPEPPSL1A6NEC2 478 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 NCF1BA6NI72 391 aaPredicted RBP17.84■□□□□ 0.45
SMPD1-201ENST00000342245 NCF1CA8MVU1 366 aaPredicted RBP17.84■□□□□ 0.45
SMPD1-201ENST00000342245 LZTS3O60299 673 aaPredicted RBP17.84■□□□□ 0.45
SMPD1-201ENST00000342245 IFNA14P01570 189 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 S100A3P33764 101 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 STC1P52823 247 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 ATP12AP54707 1039 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 CXCL9Q07325 125 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 PLA2G15Q8NCC3 412 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 UTP15Q8TED0 518 aaKnown RBP17.84■□□□□ 0.45
SMPD1-201ENST00000342245 IMP4Q96G21 291 aaKnown RBP17.84■□□□□ 0.45
SMPD1-201ENST00000342245 LINC00052Q96N35 136 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 MAPKAP1Q9BPZ7 522 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 NUDT4Q9NZJ9 180 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 TRPM5Q9NZQ8 1165 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 MPP6Q9NZW5 540 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 C7orf66A4D0T2 115 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 MFSD2BA6NFX1 497 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 ABCD4O14678 606 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 AP2A2O94973 939 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 LALBAP00709 142 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 COX10Q12887 443 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 ABRAXAS2Q15018 415 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 PCBP2Q15366 365 aaKnown RBP eCLIP17.84■□□□□ 0.45
SMPD1-201ENST00000342245 FBXO48Q5FWF7 155 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 NOMO2Q5JPE7 1267 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 OVOS1Q6IE37 1185 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 HFE2Q6ZVN8 426 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 PLPPR4Q7Z2D5 763 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 GLCCI1Q86VQ1 547 aa17.84■□□□□ 0.45
SMPD1-201ENST00000342245 OR10G2Q8NGC3 310 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms